Probe Set ID Chip Organism Annotation Date Sequence Type Sequence Source Sequence Derived From Sequence Description Sequence ID Transcript ID Group ID Title Gene Symbol Location Unigene LocusLink SwissProt EC Number OMIM Ensembl ID References Full Length Ref. Sequences Biological Process (GO) Cellular Component (GO) Molecular Function (GO) Biochemical Function (Proteome) Cellular Role (Proteome) Molecular Localization (Proteome) Organismal Role (Proteome) Subcellular Localization (Proteome) Pathways GenMAPP Pathways KEGG InterPro Pfam BLOCKS SCOP TMM Protein Families Protein Similarities BLASTP (GenBank NR) Protein Similarities BLASTx (SwissProt/TrEMBL) Orthologs/Homologs Genome Alignment Overlapping Transcripts 1007_s_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank U48705 "U48705 /FEATURE=mRNA /DEFINITION=HSU48705 Human receptor tyrosine kinase DDR gene, complete cds" U48705mRNA U48705mRNA 2010634 "discoidin domain receptor family, member 1" DDR1 Chr:6p21.3 Hs.75562 780 Q08345 EC:2.7.1.112 --- ENSG00000137332 --- NM_001954 // discoidin receptor tyrosine kinase isoform b /// NM_013993 // discoidin receptor tyrosine kinase isoform a /// NM_013994 // discoidin receptor tyrosine kinase isoform c 7155 // cell adhesion // predicted/computed 5887 // integral to plasma membrane // predicted/computed 4714 // transmembrane receptor protein tyrosine kinase // predicted/computed Receptor (signalling) // predicted/computed /// Transferase // not recorded --- Integral membrane // predicted/computed --- --- --- --- "IPR001245 // Tyrosine protein kinase /// IPR002011 // Receptor tyrosine kinase, class II /// IPR000421 // Coagulation factor 5/8 type C domain (FA58C) /// IPR000719 // Eukaryotic protein kinase" pkinase // Protein kinase domain;1.8e-68 /// pkinase // Protein kinase domain;2.2e-67 /// pkinase // Protein kinase domain;9.3e-70 /// F5_F8_type_C // F5/8 type C domain;2.9e-59 IPB000959 // POLO box duplicated region;0.0083 /// IPB000959 // POLO box duplicated region;0.0079 d1iepa_ // d.144.1.2 // Abelsone tyrosine kinase (abl) ;2.82e-66 /// d1iepa_ // d.144.1.2 // Abelsone tyrosine kinase (abl) ;1.54e-67 /// d1czsa_ // b.18.1.2 // C2 domain of factor V ;9.53e-45 /// d1iepa_ // d.144.1.2 // Abelsone tyrosine kinase (abl) ;3e-67 numtm:1;Nin-prob:0.11013;type:tm; /// numtm:1;Nin-prob:0.11542;type:tm; /// numtm:1;Nin-prob:0.09917;type:tm; EC:2.7.1.37 // TGR2_HUMAN TGF-BETA RECEPTOR TYPE II PRECURSOR (EC 2.7.1.37) (TGFR-2) (TGF-BETA TYPE II RECEPTOR).;2.59e-94 /// EC:2.7.1.37 // TGR2_HUMAN TGF-BETA RECEPTOR TYPE II PRECURSOR (EC 2.7.1.37) (TGFR-2) (TGF-BETA TYPE II RECEPTOR).;9.84e-91 /// EC:2.7.1.37 // TGR2_HUMAN TGF-BETA RECEPTOR TYPE II PRECURSOR (EC 2.7.1.37) (TGFR-2) (TGF-BETA TYPE II RECEPTOR).;1.16e-92 /// Hanks:DDR // HUMRTK_1 (DDR) KINASES:5.11.1 | PTK Group B membrane spanning protein tyrosine kinases.PTK XX DDR/TKT family .DDR;1e-158 /// Hanks:DDR // HUMRTK_1 (DDR) KINASES:5.11.1 | PTK Group B membrane spanning protein tyrosine kinases.PTK XX DDR/TKT family .DDR;1e-172 /// Hanks:DDR // HUMRTK_1 (DDR) KINASES:5.11.1 | PTK Group B membrane spanning protein tyrosine kinases.PTK XX DDR/TKT family .DDR;1e-156 "7669483 // discoidin receptor tyrosine kinase isoform a; PTK3A protein tyrosine kinase 3A; cell adhesion kinase; epithelial discoidin domain receptor 1; neurotrophic tyrosine kinase, receptor, type 4; neuroepithelial tyrosine kinase; mammarian carcinoma kinase 10 [Homo sapiens];0.0 /// 1362916 // protein-tyrosine kinase (EC 2.7.1.112) trkE precursor - human;0.0 /// 7669487 // discoidin receptor tyrosine kinase isoform b; PTK3A protein tyrosine kinase 3A; cell adhesion kinase; epithelial discoidin domain receptor 1; neurotrophic tyrosine kinase, receptor, type 4; neuroepithelial tyrosine kinase; mammarian carcinoma kinase 10 [Homo sapiens];0.0 /// 7669485 // discoidin receptor tyrosine kinase isoform c; PTK3A protein tyrosine kinase 3A; cell adhesion kinase; epithelial discoidin domain receptor 1; neurotrophic tyrosine kinase, receptor, type 4; neuroepithelial tyrosine kinase; mammarian carcinoma kinase 10 [Homo sapiens];0.0" DDR1_MOUSE // Gene:DDR1 Gene:EDDR1 Gene:CAK Gene:MPK6 Epithelial discoidin domain receptor 1 precursor (EC 2.7.1.112) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase MPK-6). length=911;0 /// O55059 // AXL RECEPTOR TYROSINE KINASE (FRAGMENT). length=78;1e-16 /// Q26296 // Gene-TRE:TK4 Gene-TRE:DTK4 PROTEIN-TYROSINE KINASE (FRAGMENT). length=56;6e-12 /// Q61986 // Gene-TRE:NSK1 NSK1 PROTEIN (FRAGMENT). length=67;2e-19 /// DDR1_RAT // Gene:DDR1 Gene:EDDR1 Gene:PTK3 Epithelial discoidin domain receptor 1 precursor (EC 2.7.1.112) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Protein-tyrosine kinase PTK-3). length=910;0 /// O35407 // Gene-TRE:NEP RECEPTOR-LIKE TYROSINE KINASE. length=911;0 /// Q9UD86 // PROTEIN TYROSINE KINASE (FRAGMENT). length=52;1e-24 /// Q9UD37 // HGK2=TRKA NERVE GROWTH FACTOR TYROSINE KINASE HOMOLOG. length=54;8e-26 /// DDR1_HUMAN // SW:Q14196 SW:Q16562 Gene:DDR1 Gene:EDDR1 Gene:CAK Gene:TRKE Gene:RTK6 Epithelial discoidin domain receptor 1 precursor (EC 2.7.1.112) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (TRK E) (Protein-tyrosine kinase RTK 6) (CD167a antigen). length=913;0 /// Q9R1G9 // INSULIN RECEPTOR (FRAGMENT). length=69;1e-14 /// Q96T62 // Gene-TRE:DDR1 DISCOIDIN DOMAIN RECEPTOR DDR1D (FRAGMENT). length=82;1e-40 /// Q9UD36 // MAMMARY CARCINOMA KINASE 10B (FRAGMENT). length=50;7e-24 "1370216_at RAE230A // 86.31% Discoidin domain receptor family, member 1 Putative Ortholog /// L26525_at RG-U34A // 86.31% Discoidin domain receptor family, member 1 Putative Ortholog /// 100155_at MG-U74Av2 // discoidin domain receptor family, member 1 Curated Ortholog /// 1415797_at MOE430A // discoidin domain receptor family, member 1 Curated Ortholog /// 1435820_x_at MOE430A // discoidin domain receptor family, member 1 Curated Ortholog /// 1415798_at MOE430A // discoidin domain receptor family, member 1 Curated Ortholog /// 1439382_x_at MOE430A // discoidin domain receptor family, member 1 Curated Ortholog /// 1438367_x_at MOE430A // discoidin domain receptor family, member 1 Curated Ortholog /// 1459990_at MOE430A // discoidin domain receptor family, member 1 Curated Ortholog /// l57509_s_at Mu11KsubA // discoidin domain receptor family, member 1 Curated Ortholog /// 1456226_x_at MOE430A // discoidin domain receptor family, member 1 Curated Ortholog /// 1437619_x_at MOE430A // discoidin domain receptor family, member 1 Curated Ortholog" chr6p21.33 // 30923123-30923696 // + // 99 "Hs.75562 // 8 // NM_001954 // discoidin domain receptor family, member 1 // chr6 // 30911980-30923746 // + /// Hs.75562 // 8 // NM_013993 // discoidin domain receptor family, member 1 // chr6 // 30911980-30923746 // + /// Hs.75562 // 8 // NM_013994 // discoidin domain receptor family, member 1 // chr6 // 30911980-30923746 // +" 1053_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank M87338 "M87338 /FEATURE= /DEFINITION=HUMA1SBU Human replication factor C, 40-kDa subunit (A1) mRNA, complete cds" M87338 M87338 --- "replication factor C (activator 1) 2, 40kDa" RFC2 Chr:7q11.23 Hs.139226 5982 P35250 --- 600404 ENSG00000049541 --- "NM_002914 // replication factor C (activator 1) 2, 40kDa" --- 5663 // DNA replication factor C complex // experimental evidence 3687 // DNA replication factor // not recorded /// 5524 // ATP binding // experimental evidence DNA polymerase or subunit // experimental evidence /// Activator // not recorded /// Transferase // experimental evidence DNA synthesis // experimental evidence DNA-associated (direct or indirect) // experimental evidence --- Nuclear // predicted/computed --- --- "IPR003959 // AAA ATPase, central region /// IPR000862 // Replication factor C conserved domain /// IPR003593 // AAA ATPase" AAA // ATPase family associated with various cellul;3.4e-05 IPB002894 // HypB/UreG nucleotide-binding domain;0.0083 d1iqpa1 // a.80.1.1 // Replication factor C ;2.9e-26 /// d1iqpa2 // c.37.1.13 // Replication factor C ;1.1e-51 --- EC:3.4.21.53 // LON_VIBPA ATP-DEPENDENT PROTEASE LA (EC 3.4.21.53).;5.41e-27 "539678 // replication factor C - human;0.0 /// 4506487 // replication factor C (activator 1) 2, 40kDa; replication factor C (activator 1) 2 (40kD) [Homo sapiens];0.0" "Q9NWI4 // CDNA FLJ20837 FIS, CLONE ADKA02602. length=208;7e-18 /// Q9UHS7 // PRO1992. length=52;2e-13 /// Q99K91 // SIMILAR TO REPLICATION FACTOR C (ACTIVATOR 1) 2 (40KD) (FRAGMENT). length=272;1e-150 /// AC14_MOUSE // Gene:RFC2 Activator 1 40 kDa subunit (Replication factor C 40 kDa subunit) (A1 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40). length=349;0 /// Q96MM0 // CDNA FLJ32172 FIS, CLONE PLACE6000555. length=163;8e-17 /// Q9BU93 // SIMILAR TO REPLICATION FACTOR C (ACTIVATOR 1) 2 (40KD). length=320;1e-178 /// AC14_HUMAN // SW:P32846 Gene:RFC2 Activator 1 40 kDa subunit (Replication factor C 40 kDa subunit) (A1 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40). length=354;0 /// Q9D0K3 // Gene-TRE:RFC2 Gene-TRE:2610008M13RIK 2610008M13RIK PROTEIN. length=349;0 /// Q9H6G8 // CDNA: FLJ22294 FIS, CLONE HRC04426. length=120;7e-18 /// Q9QXI2 // Gene-TRE:RFC2 REPLICATION FACTOR C SUBUNIT 2 (FRAGMENT). length=216;1e-117 /// Q9H7S6 // CDNA FLJ14310 FIS, CLONE PLACE3000271. length=120;2e-11" rc_AA899195_at RG-U34B // 87.05% replication factor C (activator 1) 2 (40kD) Putative Ortholog /// 1370910_at RAE230A // 87.05% replication factor C (activator 1) 2 (40kD) Putative Ortholog /// 1457669_x_at MOE430B // replication factor C (activator 1) 2 (40kD) Curated Ortholog /// Msa.9000.0_s_at Mu11KsubB // replication factor C (activator 1) 2 (40kD) Curated Ortholog /// 1417503_at MOE430A // replication factor C (activator 1) 2 (40kD) Curated Ortholog /// 160759_at MG-U74Av2 // replication factor C (activator 1) 2 (40kD) Curated Ortholog /// 1457638_x_at MOE430B // replication factor C (activator 1) 2 (40kD) Curated Ortholog chr7q11.23 // 72286554-72290190 // - // 95 "Hs.139226 // 3 // NM_002914 // replication factor C (activator 1) 2, 40kDa // chr7 // 72286247-72308977 // -" 117_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank X51757 X51757 /FEATURE=cds /DEFINITION=HSP70B Human heat-shock protein HSP70B' gene X51757cds X51757cds --- heat shock 70kDa protein 6 (HSP70B') HSPA6 Chr:1cen-qter Hs.3268 3310 AAH35665 /// P17066 /// Q9BT95 --- --- ENSG00000173110 --- NM_002155 // heat shock 70kDa protein 6 (HSP70B') 6951 // heat shock response // experimental evidence --- 3773 // heat shock protein // experimental evidence --- --- --- --- --- --- --- IPR001023 // Heat shock protein Hsp70 HSP70 // Hsp70 protein;0 IPB003494 // Cell division protein FtsA;0.0059 "d1ckra_ // e.20.1.1 // DnaK ;2.54e-69 /// d1hjoa1 // c.55.1.1 // Heat shock protein 70kDa, ATPase fragment ;1.55e-79" --- --- 4504515 // heat shock 70kDa protein 6 (HSP70B'); heat shock 70kD protein 6 (HSP70B'); Heat-shock 70kD protein-6 (HSP70B') [Homo sapiens];0.0 /// 23274232 // heat shock 70kDa protein 6 (HSP70B') [Homo sapiens];0.0 "Q9BIS5 // HEAT SHOCK PROTEIN HSP70AA. length=642;0 /// HS76_HUMAN // Gene:HSPA6 Gene:HSP70B' HEAT SHOCK 70 KDA PROTEIN 6 (HEAT SHOCK 70 KDA PROTEIN B'). length=643;0 /// Q9BIS1 // HEAT SHOCK PROTEIN HSP70BB. length=641;0 /// Q9R2A1 // Gene-TRE:HSP70-3 Gene-TRE:HSC70T SPERMATID-SPECIFIC HEAT SHOCK PROTEIN 70 (FRAGMENT). length=111;1e-46 /// HS74_YEAST // Gene:SSA4 Gene:YER103W HEAT SHOCK PROTEIN SSA4. length=641;0 /// HS73_YEAST // SW:P18862 Gene:SSA3 Gene:YBL075C Gene:YBL0610 Gene:YBL06.07 HEAT SHOCK PROTEIN SSA3. length=649;0 /// O88686 // Gene-TRE:HSPA1L Gene-TRE:HSC70T SPERMATID-SPECIFIC HEAT SHOCK PROTEIN 70. length=641;0 /// Q9BIR9 // HEAT SHOCK PROTEIN HSP70BC. length=641;0 /// HS71_YEAST // Gene:SSA1 Gene:YAL005C HEAT SHOCK PROTEIN SSA1 (HEAT SHOCK PROTEIN YG100). length=641;0 /// HS7A_DROME // SW:Q9VUA7 Gene:HSC70-1 Gene:HSC1 Gene:CG8937 HEAT SHOCK 70 KDA PROTEIN COGNATE 1 (HEAT SHOCK 70 KDA PROTEIN 70C). length=641;0 /// HS72_DROME // Gene:HSP70BA Gene:HSP70BB Gene:HSP70BC MAJOR HEAT SHOCK 70 KDA PROTEIN B (HEAT SHOCK PROTEIN 70B) (HSP70- 87C1). length=641;0 /// Q96IS6 // SIMILAR TO HEAT SHOCK COGNATE 71-KD PROTEIN. length=586;0 /// Q05830 // Gene-TRE:SSA1 Gene-TRE:YG100 Gene-TRE:YAL005C HEAT SHOCK PROTEIN YG100 (FRAGMENT). length=148;6e-59 /// Q9BT95 // SIMILAR TO HEAT SHOCK 70KD PROTEIN 6 (HSP70B') (FRAGMENT). length=145;4e-80 /// Q8UUJ8 // Gene-TRE:HSP70 STRESS PROTEIN HSP70. length=643;0 /// Q9BIS0 // HEAT SHOCK PROTEIN HSP70BC. length=641;0 /// Q9BIS3 // HEAT SHOCK PROTEIN HSP70BA. length=641;0 /// Q63256 // Gene-TRE:HSP 70 HEAT SHOCK PROTEIN 70. length=641;0 /// Q9QWU1 // HSC70T (FRAGMENT). length=552;0 /// HS71_MOUSE // SW:Q61689 Gene:HSPA1 Gene:HSP70A1 Gene:HSP70-1 Gene:HCP70.1 HEAT SHOCK 70 KDA PROTEIN 1 (HSP70.1) (HSP70-1/HSP70-2). length=641;0 /// Q9BIR7 // HEAT SHOCK PROTEIN HSP70BC. length=641;0 /// Q925V6 // HSP70. length=642;0 /// O42359 // Gene-TRE:HSP70 HEAT SHOCK COGNATE 70 KDA PROTEIN (FRAGMENT). length=214;2e-98 /// HS68_DROME // Gene:HSP68 Gene:CG5436 HEAT SHOCK PROTEIN 68. length=635;0 /// HS70_DROME // Gene:HSP70AA Gene:HSP70A Gene:CG18743 Major heat shock 70 kDa protein Aa (Heat shock protein 70Aa) (HSP70- 87A7). length=642;0 /// Q9BIS2 // HEAT SHOCK PROTEIN HSP70BB. length=641;0 /// HS73_RAT // Gene:HSP70-3 HEAT SHOCK 70 KDA PROTEIN 3 (HSP70.3). length=641;0 /// HS7H_HUMAN // SW:Q9UQM1 SW:O75634 SW:Q96QC9 Gene:HSPA1L Heat shock 70 kDa protein 1-HOM (HSP70-HOM). length=641;0 /// Q61698 // Gene-TRE:HSP70-1 HEAT SHOCK PROTEIN (HSP68) (FRAGMENT). length=228;3e-91 /// HS72_YEAST // Gene:SSA2 Gene:YLL024C Gene:L0931 HEAT SHOCK PROTEIN SSA2. length=638;0 /// HS71_DROME // Gene:HSP70AB Gene:HSP70A MAJOR HEAT SHOCK 70 KDA PROTEIN AB (HEAT SHOCK PROTEIN 70AB) (HSP70- 87A7). length=643;0 /// O88687 // Gene-TRE:HSP70-3 Gene-TRE:HSP70.3 HEAT SHOCK PROTEIN 70 (FRAGMENT). length=43;2e-13 /// Q96H53 // SIMILAR TO HEAT SHOCK 70KD PROTEIN 8 (FRAGMENT). length=222;2e-83 /// Q9NZ87 // UNCHARACTERIZED BONE MARROW PROTEIN BM034. length=129;3e-34 /// Q9BIS4 // HEAT SHOCK PROTEIN HSP70BA. length=641;0 /// HS77_HUMAN // SW:P19790 Gene:HSPA7 Gene:HSP70B Heat shock 70 kDa protein 7 (Heat shock 70 kDa protein B) (Fragment). length=247;1e-130 /// HS71_RAT // SW:P42853 Gene:HSP70-1 Gene:HSP70-2 HEAT SHOCK 70 KDA PROTEIN 1/2 (HSP70.1/2). length=641;0 /// Q9QWJ5 // Gene-TRE:H2-BF HSP70. length=641;0 /// Q96QC9 // Gene-TRE:HSPA1L HEAT SHOCK PROTEIN. length=641;0 /// Q9NWW3 // CDNA FLJ20564 FIS, CLONE KAT12033. length=129;2e-33 /// Q9BIR8 // HEAT SHOCK PROTEIN HSP70BC. length=641;0 /// Q91ZU4 // Gene-TRE:HSC70T HEAT SHOCK PROTEIN HSC70T (FRAGMENT). length=461;0 /// Q05834 // Gene-TRE:SSB1 Gene-TRE:YDL229W SSB1 PROTEIN (FRAGMENT). length=224;4e-74 /// O75634 // Gene-TRE:HSPA1L HEAT SHOCK PROTEIN 70 TESTIS VARIANT. length=641;0 /// O42360 // Gene-TRE:HSP70 HEAT SHOCK COGNATE 70 KDA PROTEIN (FRAGMENT). length=214;1e-102 /// Q42010 // HEAT SHOCK PROTEIN COGNATE 70 (FRAGMENT). length=68;5e-23 /// Q9QZ38 // HEAT SHOCK COGNATE HSC73 (FRAGMENT). length=58;3e-22 /// O88688 // Gene-TRE:HSP70-3 Gene-TRE:HSP70.3 HEAT SHOCK PROTEIN 70 (FRAGMENT). length=143;1e-47 /// Q05829 // Gene-TRE:SSA1 Gene-TRE:YG100 Gene-TRE:YAL005C HEAT SHOCK PROTEIN YG100 (FRAGMENT). length=339;1e-145 /// Q9S9N1 // Gene-TRE:T24D18.14 T24D18.14 PROTEIN. length=646;0 /// Q9UQC1 // Gene-TRE:HSP70-1 HEAT SHOCK PROTEIN 72 (FRAGMENT). length=151;1e-70 /// Q96BE0 // HYPOTHETICAL 29.4 KDA PROTEIN (FRAGMENT). length=269;1e-107 /// Q91ZU5 // Gene-TRE:HSC70T HEAT SHOCK PROTEIN HSC70T (FRAGMENT). length=282;1e-119 /// HS7T_MOUSE // SW:Q61693 Gene:HSPA1L Gene:HSC70T Heat shock 70 kDa-like protein 1. length=641;0 /// Q9UQM1 // HSP70-HOM. length=641;0" --- chr1q23.3 // 157228159-157228604 // + // 100 Hs.3268 // 4 // NM_002155 // heat shock 70kDa protein 6 (HSP70B') // chr1 // 157226709-157228641 // + 121_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank X69699 X69699 /FEATURE= /DEFINITION=HSPAX8A H.sapiens Pax8 mRNA X69699 X69699 --- paired box gene 8 PAX8 Chr:2q12-q14 Hs.73149 7849 Q06710 /// Q96J49 --- 167415 ENSG00000125618 --- NM_003466 // paired box gene 8 isoform PAX8A /// NM_013951 // paired box gene 8 isoform PAX8B /// NM_013952 // paired box gene 8 isoform PAX8C /// NM_013953 // paired box gene 8 isoform PAX8D /// NM_013992 // paired box gene 8 isoform PAX8E 7397 // histogenesis and organogenesis // predicted/computed /// 7275 // development // extended:inferred from sequence similarity; PAX; 1.6e-87 /// 7345 // embryogenesis and morphogenesis // predicted/computed --- 4996 // thyroid-stimulating hormone receptor // experimental evidence /// 3700 // transcription factor // predicted/computed DNA-binding protein // not recorded Differentiation // not recorded DNA-associated (direct or indirect) // not recorded Cell fate specification // not recorded /// Embryonic development // not recorded --- --- --- "IPR001523 // Paired box protein, N-terminal" PAX // 'Paired box' domain;1.6e-87 IPB001523 // 'Paired box' domain;1.3e-121 /// IPB001523 // 'Paired box' domain;1.9e-119 /// IPB001523 // 'Paired box' domain;7.7e-122 /// IPB001523 // 'Paired box' domain;8.6e-120 /// IPB001523 // 'Paired box' domain;7.9e-118 d1k78a1 // a.4.1.5 // Pax-5 ;1.77e-25 --- --- "7524365 // paired box gene 8, isoform PAX8D; paired domain gene 8 [Homo sapiens];0.0 /// 7524361 // paired box gene 8, isoform PAX8B; paired domain gene 8 [Homo sapiens];0.0 /// 7669542 // paired box gene 8, isoform PAX8E; paired domain gene 8 [Homo sapiens];e-162 /// 1082940 // paired box transcription factor Pax-8, splice form g - dog;0.0 /// 7524365 // paired box gene 8, isoform PAX8D; paired domain gene 8 [Homo sapiens];e-163 /// 7524363 // paired box gene 8, isoform PAX8C; paired domain gene 8 [Homo sapiens];0.0 /// 7669542 // paired box gene 8, isoform PAX8E; paired domain gene 8 [Homo sapiens];e-168 /// 5803117 // paired box gene 8, isoform PAX8A; paired domain gene 8 [Homo sapiens];0.0" "PAX8_RAT // Gene:PAX8 Gene:PAX-8 Paired box protein Pax-8. length=458;0 /// Q8VDB4 // Gene-TRE:PAX-6 PAIRED BOX PROTEIN. length=118;7e-38 /// PAX8_HUMAN // SW:Q09155 SW:Q16337 SW:Q16338 SW:Q16339 Gene:PAX8 Paired box protein Pax-8. length=450;0 /// Q96J49 // PAIRED BOX GENE 8. length=450;0 /// Q8VBY9 // Gene-TRE:PAX-6 PAIRED BOX PROTEIN. length=102;3e-30 /// O93372 // Gene-TRE:PAX8 TRANSCRIPTION FACTOR (FRAGMENT). length=429;1e-153 /// Q99573 // Gene-TRE:PAX-8 PAX-8 PROTEIN (FRAGMENT). length=60;2e-24 /// PAX8_MOUSE // SW:P97342 Gene:PAX8 Gene:PAX-8 Paired box protein Pax-8. length=457;0 /// PX8D_HUMAN // SW:Q16337 Gene:PAX8 PAIRED BOX PROTEIN PAX-8, ISOFORMS 8C/8D. length=399;1e-176" 1387730_at RAE230A // 90.21% Pax-8 protein Putative Ortholog /// X94246_at RG-U34A // 90.21% Pax-8 protein Putative Ortholog /// 1418208_at MOE430A // paired box gene 8 Curated Ortholog /// 96504_at MG-U74Av2 // paired box gene 8 Curated Ortholog chr2q13 // 111895698-111896221 // - // 99 Hs.73149 // 2 // X69699 // paired box gene 8 // chr2 // 111895698-111957247 // - 1255_g_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank L36861 "L36861 /FEATURE=expanded_cds /DEFINITION=HUMGCAPB Homo sapiens guanylate cyclase activating protein (GCAP) gene exons 1-4, complete cds" L36861expanded_cds L36861expanded_cds 2010548 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Q9NU14 // Gene-TRE:GUCA1A DJ139D8.2 (GUANYLATE CYCLASE ACTIVATOR 1A (RETINA)). length=201;1e-112 /// GCA1_MOUSE // Gene:GUCA1A Gene:GUCA1 Gene:GCAP1 Gene:GCAP GUANYLYL CYCLASE ACTIVATING PROTEIN 1 (GCAP 1) (GUANYLATE CYCLASE ACTIVATOR 1A). length=201;1e-101 /// GCA1_HUMAN // SW:Q9NU14 Gene:GUCA1A Gene:GUCA1 Gene:GCAP1 Gene:GCAP Guanylyl cyclase activating protein 1 (GCAP 1) (Guanylate cyclase activator 1A). length=200;1e-113 --- --- --- 1294_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank L13852 "L13852 /FEATURE= /DEFINITION=HUME1URP Homo sapiens ubiquitin-activating enzyme E1 related protein mRNA, complete cds" L13852 L13852 --- ubiquitin-activating enzyme E1-like UBE1L Chr:3p21 Hs.16695 7318 P41226 /// Q9BRB2 --- 191325 --- --- NM_003335 // ubiquitin-activating enzyme E1-like 6464 // protein modification // not recorded --- 3824 // enzyme // extended:inferred from electronic annotation; ThiF; 3.4e-48 /// 4840 // ubiquitin conjugating enzyme // not recorded /// 8047 // enzyme activator // not recorded Protein conjugation factor // not recorded /// Activator // not recorded Protein degradation // not recorded --- --- --- Proteasome_Degradation --- IPR000011 // Ubiquitin-activating enzyme /// IPR000594 // UBA/THIF-type NAD/FAD binding fold /// IPR000127 // Ubiquitin-activating enzyme replicated domain UBACT // Repeat in ubiquitin-activating (UBA) protein;4.2e-39 /// ThiF // ThiF family;9e-110 IPB000011 // Ubiquitin-activating enzyme;2.2e-72 --- --- --- "4507767 // ubiquitin-activating enzyme E1-like; Ubiquitin-activating enzyme-2; ubiquitin-activating enzyme E1, like [Homo sapiens];0.0 /// 477152 // ubiquitin--protein ligase E1 homolog - human;0.0" UBAL_HUMAN // Gene:UBE1L Gene:UBE2 Ubiquitin-activating enzyme E1 homolog (D8). length=1011;0 /// Q9ET03 // Gene-TRE:UBE1L UBE1L (FRAGMENT). length=775;0 /// Q9ET02 // UBE1L (FRAGMENT). length=770;0 /// Q9DBK7 // Gene-TRE:1300004C08RIK 1300004C08RIK PROTEIN. length=977;0 /// Q9BRB2 // UBIQUITIN-ACTIVATING ENZYME E1. length=1012;0 --- --- --- 1316_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank X55005 "X55005 /FEATURE=mRNA /DEFINITION=HSCERBAR Homo sapiens mRNA for thyroid hormone receptor alpha 1 THRA1, (c-erbA-1 gene)" X55005mRNA X55005mRNA --- "thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)" THRA Chr:17q11.2 Hs.724 7067 P10827 --- 190120 ENSG00000126351 --- "NM_003250 // thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)" "6366 // transcription from Pol II promoter // experimental evidence /// 6351 // transcription, DNA-dependent // experimental evidence" 5634 // nucleus // not recorded 3700 // transcription factor // experimental evidence /// 4887 // thyroid hormone receptor // experimental evidence DNA-binding protein // predicted/computed /// Receptor (signalling) // predicted/computed /// Activator // predicted/computed Pol II transcription // predicted/computed DNA-associated (direct or indirect) // predicted/computed --- Nuclear // experimental evidence --- --- "IPR001628 // Zn-finger, C4-type steroid receptor /// IPR001728 // Thyroid hormone receptor /// IPR001723 // Steroid hormone receptor /// IPR000536 // Ligand-binding domain of nuclear hormone receptor" "zf-C4 // Zinc finger, C4 type (two domains);2.5e-50 /// hormone_rec // Ligand-binding domain of nuclear hormone;6.9e-25" IPB002360 // Involucrin;0.0062 "d1ilga_ // a.123.1.1 // Pregnane x receptor, PXR ;4.15e-79" --- --- "6018474 // thyroid hormone receptor alpha 2 [Homo sapiens];0.0 /// 20127452 // thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian); Thyroid hormone receptor, alpha (oncogene ERBA1); thyroid hormone receptor, alpha (avian erythroblastic leukemia viral (v-erb-a) oncogene homolog) [Homo sapiens];0.0" THA1_HUMAN // Gene:THRA Gene:NR1A1 Gene:THRA1 Gene:ERBA1 THYROID HORMONE RECEPTOR ALPHA-1 (C-ERBA-ALPHA-1) (EAR-7-1) (EAR7). length=410;0 /// O42535 // Gene-TRE:COUPTF5 COUP-TF (FRAGMENT). length=46;3e-12 /// O42560 // Gene-TRE:TRB TRB (FRAGMENT). length=42;2e-15 /// Q90Y31 // Gene-TRE:TR-BETA THYROID HORMONE RECEPTOR BETA (FRAGMENT). length=278;1e-123 /// O42559 // TRA (FRAGMENT). length=41;5e-19 /// THA1_MOUSE // SW:P10685 SW:Q63107 Gene:THRA Gene:NR1A1 Gene:C-ERBA-ALPHA THYROID HORMONE RECEPTOR ALPHA-1. length=410;0 /// Q96H73 // THYROID HORMONE RECEPTOR. length=410;0 X12744_at RG-U34A // 87.71% thyroid hormone receptor alpha Putative Ortholog /// 1375535_at RAE230A // 87.71% ESTs Putative Ortholog /// 1367726_at RAE230A // 87.71% thyroid hormone receptor alpha Putative Ortholog /// X12744_at RN-U34 // 87.71% thyroid hormone receptor alpha Putative Ortholog /// M31174_at RN-U34 // 87.71% thyroid hormone receptor alpha Putative Ortholog /// M31174_at RT-U34 // 87.71% thyroid hormone receptor alpha Putative Ortholog /// 1370691_a_at RAE230A // 87.71% thyroid hormone receptor alpha Putative Ortholog /// M31174_g_at RN-U34 // 87.71% thyroid hormone receptor alpha Putative Ortholog /// M31174_g_at RT-U34 // 87.71% thyroid hormone receptor alpha Putative Ortholog /// rc_AA899287_at RG-U34B // 87.71% ESTs Putative Ortholog /// M31174_at RG-U34A // 87.71% thyroid hormone receptor alpha Putative Ortholog /// M31174_g_at RG-U34A // 87.71% thyroid hormone receptor alpha Putative Ortholog /// rc_AI103917_at RG-U34C // 87.71% ESTs Putative Ortholog /// Msa.42117.0_s_at Mu11KsubB // thyroid hormone receptor alpha Curated Ortholog /// 99077_at MG-U74Av2 // thyroid hormone receptor alpha Curated Ortholog /// 99076_at MG-U74Av2 // thyroid hormone receptor alpha Curated Ortholog /// x51983_s_at Mu11KsubB // thyroid hormone receptor alpha Curated Ortholog /// 1454675_at MOE430A // thyroid hormone receptor alpha Curated Ortholog /// 1416958_at MOE430A // thyroid hormone receptor alpha Curated Ortholog /// Msa.7694.0_s_at Mu11KsubB // thyroid hormone receptor alpha Curated Ortholog /// 92348_at MG-U74Av2 // thyroid hormone receptor alpha Curated Ortholog /// 107103_at MG-U74Bv2 // thyroid hormone receptor alpha Curated Ortholog /// 1416959_at MOE430A // thyroid hormone receptor alpha Curated Ortholog /// u12142_s_at Mu11KsubA // thyroid hormone receptor alpha Curated Ortholog /// X07751_s_at Mu11KsubB // thyroid hormone receptor alpha Curated Ortholog chr17q21.1 // 40312921-40313233 // - // 99 "Hs.724 // 1 // X55005 // thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) // chr17 // 40312878-40373444 // -" 1320_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank X79510 X79510 /FEATURE=cds /DEFINITION=HSPTPD1 H.sapiens mRNA for protein-tyrosine-phosphatase D1 X79510cds X79510cds --- "protein tyrosine phosphatase, non-receptor type 21" PTPN21 Chr:14q31.3 Hs.155693 11099 Q16825 EC:3.1.3.48 603271 ENSG00000070778 --- "NM_007039 // protein tyrosine phosphatase, non-receptor type 21" 6470 // protein amino acid dephosphorylation // predicted/computed 157 // peripheral plasma membrane protein // predicted/computed /// 5856 // cytoskeleton // predicted/computed 4725 // protein tyrosine phosphatase // predicted/computed Hydrolase // predicted/computed --- Peripheral membrane // predicted/computed --- Cytoskeletal // predicted/computed --- --- IPR000387 // Tyrosine specific protein phosphatase and dual specificity protein phosphatase /// IPR000242 // Tyrosine specific protein phosphatase /// IPR000299 // Band 4.1 domain Band_41 // FERM domain (Band 4.1 family);1.3e-30 /// Y_phosphatase // Protein-tyrosine phosphatase;2e-104 IPB000387 // Tyrosine specific protein phosphatase and dual specificity protein phosphatase family;2.9e-06 d1gg3a3 // d.15.1.4 // Erythroid membrane protein 4.1R ;1.71e-24 /// d1gg3a2 // b.55.1.5 // Erythroid membrane protein 4.1R ;4.42e-08 /// d1fpra_ // c.45.1.2 // Tyrosine phosphatase ;1.22e-83 /// d1h4ra1 // a.11.2.1 // Merlin ;1.94e-19 --- --- "5902032 // protein tyrosine phosphatase, non-receptor type 21; protein tyrosine phosphatase D1 [Homo sapiens];0.0 /// 6755240 // protein tyrosine phosphatase, non-receptor type 21 [Mus musculus];0.0" "Q9D6E5 // Gene-TRE:PTPN21 PROTEIN TYROSINE PHOSPHATASE, NON-RECEPTOR TYPE 21. length=117;2e-60 /// PTNL_HUMAN // Gene:PTPN21 Gene:PTPD1 PROTEIN TYROSINE PHOSPHATASE, NON-RECEPTOR TYPE 21 (EC 3.1.3.48) (PROTEIN-TYROSINE PHOSPHATASE D1). length=1174;0 /// PTNL_RAT // SW:Q62732 Gene:PTPN21 Gene:PTP2E PROTEIN TYROSINE PHOSPHATASE, NON-RECEPTOR TYPE 21 (EC 3.1.3.48) (PROTEIN-TYROSINE PHOSPHATASE 2E). length=1175;0 /// PTNE_MOUSE // Gene:PTPN14 PROTEIN TYROSINE PHOSPHATASE, NON-RECEPTOR TYPE 14 (EC 3.1.3.48) (PROTEIN-TYROSINE PHOSPHATASE PTP36). length=1189;0 /// Q8WX29 // Gene-TRE:PTPN21 DJ1175B15.2 (PROTEIN TYROSINE PHOSPHATASE, NON-RECEPTOR TYPE 21) (FRAGMENT). length=1024;0 /// PTNL_MOUSE // Gene:PTPN21 PROTEIN TYROSINE PHOSPHATASE, NON-RECEPTOR TYPE 21 (EC 3.1.3.48) (PROTEIN-TYROSINE PHOSPHATASE PTP-RL10). length=1176;0 /// PTNE_HUMAN // Gene:PTPN14 Gene:PEZ PROTEIN TYROSINE PHOSPHATASE, NON-RECEPTOR TYPE 14 (EC 3.1.3.48) (PROTEIN-TYROSINE PHOSPHATASE PEZ). length=1187;0 /// Q9QWQ7 // PTP-RL10B. length=336;0" "rc_AA946488_s_at RG-U34A // 81.76% protein tyrosine phosphatase 2E Putative Ortholog /// 1368087_a_at RAE230A // 81.76% protein tyrosine phosphatase 2E Putative Ortholog /// U17971_at RG-U34A // 81.76% protein tyrosine phosphatase 2E Putative Ortholog /// 99970_at MG-U74Av2 // protein tyrosine phosphatase, non-receptor type 21 Curated Ortholog /// Msa.6892.0_s_at Mu11KsubB // protein tyrosine phosphatase, non-receptor type 21 Curated Ortholog /// 1419055_a_at MOE430A // protein tyrosine phosphatase, non-receptor type 21 Curated Ortholog /// 1419054_a_at MOE430A // protein tyrosine phosphatase, non-receptor type 21 Curated Ortholog /// d37801_s_at Mu11KsubA // protein tyrosine phosphatase, non-receptor type 21 Curated Ortholog /// 1453298_at MOE430A // protein tyrosine phosphatase, non-receptor type 21 Curated Ortholog" chr14q31.3 // 82751392-82752909 // - // 99 "Hs.155693 // 2 // NM_007039 // protein tyrosine phosphatase, non-receptor type 21 // chr14 // 82750994-82838004 // -" 1405_i_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank M21121 "M21121 /FEATURE= /DEFINITION=HUMTCSM Human T cell-specific protein (RANTES) mRNA, complete cds" M21121 M21121 --- chemokine (C-C motif) ligand 5 CCL5 Chr:17q11.2-q12 Hs.241392 6352 P13501 --- 187011 ENSG00000161570 --- NM_002985 // small inducible cytokine A5 precursor 7165 // signal transduction // experimental evidence /// 6887 // exocytosis // experimental evidence /// 7155 // cell adhesion // experimental evidence /// 6955 // immune response // experimental evidence /// 6979 // response to oxidative stress // experimental evidence /// 7267 // cell-cell signaling // experimental evidence /// 9615 // response to viruses // experimental evidence /// 6968 // cellular defense response // experimental evidence /// 6954 // inflammatory response // experimental evidence /// 6935 // chemotaxis // experimental evidence /// 6874 // calcium ion homeostasis // experimental evidence /// 6928 // cell motility // experimental evidence --- 8009 // chemokine // experimental evidence /// 5102 // receptor binding // experimental evidence /// 3800 // antiviral response protein // predicted/computed /// 4871 // signal transducer // experimental evidence --- --- Soluble // experimental evidence Cell-to-cell signalling // experimental evidence /// Pathogenic Invasion // experimental evidence /// Anti-pathogen response // experimental evidence /// Cell migration/motility // experimental evidence /// Response to injury // predicted/computed --- --- --- "IPR001811 // Small chemokine, interleukin-8 like /// IPR000827 // Small chemokine, C-C subfamily" "IL8 // Small cytokines (intecrine/chemokine), inter;2e-27" IPB001089 // Small cytokine;0.0026 "d1b3aa_ // d.9.1.1 // RANTES (regulated upon activation, normal T-cell expressed and secreted) ;2.14e-21" numtm:1;Nin-prob:0.52164;type:signal; --- "339421 // T cell-specific protein precursor;6e-47 /// 22538814 // small inducible cytokine A5 precursor; T-cell specific protein p288; T-cell specific RANTES protein; SIS-delta; regulated upon activation, normally T-expressed, and presumably secreted; beta-chemokine RANTES precursor; small inducible cytokine subfamily A (Cys-Cys), member 5 [Homo sapiens];1e-47" SY04_MOUSE // Gene:CCL4 Gene:SCYA4 Gene:MIP1B Small inducible cytokine A4 precursor (CCL4) (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (H400 protein) (SIS-gamma) (ACT2). length=92;5e-21 /// SY03_RAT // Gene:CCL3 Gene:SCYA3 Gene:MIP1A Small inducible cytokine A3 precursor (CCL3) (Macrophage inflammatory protein 1-alpha) (MIP-1-alpha). length=92;1e-21 /// SY03_HUMAN // Gene:SCYA3 Gene:G0S19-1 Gene:MIP1A Small inducible cytokine A3 precursor (CCL3) (Macrophage inflammatory protein 1-alpha) (MIP-1-alpha) (Tonsillar lymphocyte LD78 alpha protein) (G0/G1 switch regulatory protein 19-1) (G0S19-1 protein) (SIS-beta) (PAT 464.1). length=92;3e-21 /// SY3L_HUMAN // Gene:SCYA3L1 Gene:G0S19-2 Small inducible cytokine A3 like 1 precursor (Tonsillar lymphocyte LD78 beta protein) (G0/G1 switch regulatory protein 19-2) (G0S19-2 protein) (PAT 464.2). length=93;1e-21 /// SY05_RAT // Gene:CCL5 Gene:SCYA5 Small inducible cytokine A5 precursor (CCL5) (T-cell specific RANTES protein) (SIS-delta). length=92;2e-37 /// SY05_MOUSE // Gene:CCL5 Gene:SCYA5 Small inducible cytokine A5 precursor (CCL5) (T-cell specific RANTES protein) (SIS-delta) (MuRantes). length=91;3e-38 /// Q8WUD5 // SIMILAR TO HYPOTHETICAL PROTEIN FLJ21394. length=54;1e-13 /// SY05_HUMAN // SW:O43646 SW:Q9NYA2 Gene:SCYA5 Small inducible cytokine A5 precursor (CCL5) (T-cell specific RANTES protein) (SIS-delta) (T cell-specific protein P228) (TCP228). length=91;3e-47 /// Q96I68 // SIMILAR TO SMALL INDUCIBLE CYTOKINE A3 (HOMOLOGOUS TO MOUSE MIP-1A). length=93;4e-21 /// Q9NYA2 // BETA-CHEMOKINE RANTES PRECURSOR. length=91;2e-47 /// SY04_HUMAN // SW:P22617 SW:Q13704 Gene:SCYA4 Gene:MIP1B Gene:LAG1 Small inducible cytokine A4 precursor (CCL4) (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (T-cell activation protein 2) (ACT-2) (PAT 744) (H400) (SIS-gamma) (Lymphocyte activation gene-1 protein) (LAG-1) (HC21) (G-26 T lymphocyte-secreted protein). length=92;2e-20 /// Q96HL9 // SIMILAR TO HYPOTHETICAL PROTEIN PRO1722. length=66;7e-19 /// Q14745 // LD78 ALPHA BETA PRECURSOR (FRAGMENT). length=80;4e-17 u02298_s_at Mu11KsubA // chemokine (C-C motif) ligand 5 Curated Ortholog /// 98406_at MG-U74Av2 // chemokine (C-C motif) ligand 5 Curated Ortholog /// 1418126_at MOE430A // chemokine (C-C motif) ligand 5 Curated Ortholog chr17q12 // 36234512-36234557 // - // 97 Hs.241392 // 2 // NM_002985 // chemokine (C-C motif) ligand 5 // chr17 // 36234305-36243188 // - 1431_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank J02843 "J02843 /FEATURE=cds /DEFINITION=HUMCYPIIE Human cytochrome P450IIE1 (ethanol-inducible) gene, complete cds" J02843cds J02843cds --- "cytochrome P450, subfamily IIE (ethanol-inducible), polypeptide 1" CYP2E1 Chr:10q24.3-qter Hs.75183 1571 P05181 /// Q16868 EC:1.14.14.1 --- ENSG00000130649 --- "NM_000773 // cytochrome P450, family 2, subfamily E, polypeptide 1" 6118 // electron transport // extended:Unknown; p450; 1e-205 --- 4497 // monooxygenase // experimental evidence /// 15034 // cytochrome P450 // experimental evidence Oxidoreductase // experimental evidence Other metabolism // not recorded --- --- --- --- MAP00071 // Fatty acid metabolism /// MAP00361 // gamma-Hexachlorocyclohexane degradation /// MAP00380 // Tryptophan metabolism "IPR001128 // Cytochrome P450 /// IPR002401 // E-class P450, group I" p450 // Cytochrome P450;1e-205 IPB001128 // none;0.0077 d1dt6a_ // a.104.1.1 // Mammalian cytochrome p450 2c5 ;5.61e-136 numtm:1;Nin-prob:0.85378;type:signal; EC:4.2.1.92 // CP74_LINUS ALLENE OXIDE SYNTHASE PRECURSOR (EC 4.2.1.92) (HYDROPEROXIDE DEHYDRASE) (CYTOCHROME P450 74A).;8.81e-110 /// EC:1.14.13.11 // TCMO_ZINEL TRANS-CINNAMATE 4-MONOOXYGENASE (EC 1.14.13.11) (CINNAMIC ACID 4-HYDROXYLASE) (CA4H) (C4H) (P450C4H) (CYTOCHROME P450 73).;5.72e-142 /// EC:5.3.99.5 // THAS_HUMAN THROMBOXANE-A SYNTHASE (EC 5.3.99.5) (TXA SYNTHASE) (TXS).;1.88e-138 /// EC:1.14.99.10 // CPS1_HUMAN CYTOCHROME P450 XXIB (EC 1.14.99.10) (STEROID 21-HYDROXYLASE) (P450-C21B).;2.03e-135 /// EC:1.14.15.4 // CPN2_HUMAN CYTOCHROME P450 11B2 PRECURSOR (EC 1.14.15.4) (CYPXIB2) (P-450ALDO) (ALDOSTERONE SYNTHASE) (ALDOS) (ALDOSTERONE-SYNTHESIZING ENZYME) (STEROID 18-HYDROXYLASE) (P-450C18).;2.07e-138 /// EC:1.1.3.34 // CP80_BERST BERBAMUNINE SYNTHASE (EC 1.1.3.34) (CYTOCHROME P450 80) (CYPLXXX) ((S)-N-METHYLCOCLAURINE OXIDASE [C-O PHENOL-COUPLING]).;8.39e-136 /// P450:Q05421 // CYP2E-1 Cyt P450: Animalia.CYP2E-1.mou;0 "10834998 // cytochrome P450, subfamily IIE, polypeptide 1; microsomal monooxygenase; xenobiotic monooxygenase; flavoprotein-linked monooxygenase; cytochrome P450, subfamily IIE (ethanol-inducible) [Homo sapiens];0.0 /// 6470141 // cytochrome P450-2E1 [Homo sapiens];0.0" "Q64614 // CYTOCHROME P450PB-1 (FRAGMENT). length=169;5e-61 /// Q63126 // RAT CYTOCHROME P-450B TYPE B (FRAGMENT). length=48;2e-12 /// CPC6_RAT // Gene:CYP2C6 Gene:CYP2C-6 Cytochrome P450 2C6 (EC 1.14.14.1) (CYPIIC6) (P450 PB1) (PTF2). length=490;1e-164 /// CPE1_RAT // Gene:CYP2E Gene:CYP2E1 Gene:CYP2E-1 Cytochrome P450 2E1 (EC 1.14.14.1) (CYPIIE1) (P450-J) (P450RLM6). length=493;0 /// CPCT_MOUSE // Gene:CYP2C29 Cytochrome P450 2C29 (EC 1.14.14.1) (CYPIIC29) (P-450 MUT-2) (Aldehyde oxygenase). length=490;1e-165 /// Q9CVC8 // Gene-TRE:2210009K14RIK 2210009K14RIK PROTEIN (FRAGMENT). length=474;1e-166 /// Q9Z198 // MRNA FRAGMENT FOR REPETITIVE ELEMENT B2. length=39;4e-12 /// Q9UQ59 // Gene-TRE:CYP2C9 CYTOCHROME P-450 2C (FRAGMENT). length=169;2e-57 /// Q63125 // RAT CYTOCHROME P-450B TYPE B (FRAGMENT). length=48;2e-11 /// Q16872 // CYTOCHROME P-450. length=477;1e-168 /// Q9UCZ9 // CYTOCHROME P450 ARACHIDONIC ACID EPOXYGENASE ISOFORM, CYP 2C8. length=485;1e-164 /// Q16743 // Gene-TRE:CYP 2C CYTOCHROME P-450 II C (FRAGMENT). length=356;1e-128 /// CPE1_HUMAN // SW:Q9UK47 Gene:CYP2E1 Cytochrome P450 2E1 (EC 1.14.14.1) (CYPIIE1) (P450-J). length=493;0 /// Q91WN9 // SIMILAR TO CYTOCHROME P450, 2C29. length=490;1e-165 /// Q03738 // RAT CYTOCHROME P-450B TYPE E (FRAGMENT). length=48;8e-12 /// Q8WZB1 // Gene-TRE:CYP2C19 S-MEPHENYTOIN 4-HYDROXYLASE (FRAGMENT). length=217;1e-75 /// Q8WUN8 // HYPOTHETICAL 55.7 KDA PROTEIN. length=490;1e-165 /// CPCN_RAT // SW:Q64534 SW:Q63914 Gene:CYP2C23 Gene:CYP2C-23 Cytochrome P450 2C23 (EC 1.14.14.1) (CYPIIC23) (Arachidonic acid epoxygenase). length=494;1e-164 /// CPE1_MOUSE // Gene:CYP2E Gene:CYP2E1 Gene:CYP2E-1 Cytochrome P450 2E1 (EC 1.14.14.1) (CYPIIE1) (P450-J) (P450-ALC). length=493;0 /// Q16756 // CYTOCHROME P-450 (FRAGMENT). length=487;1e-169 /// Q9UK47 // Gene-TRE:CYP2E1 CYTOCHROME P450-2E1 (EC 1.14.14.1). length=493;0 /// Q16868 // Gene-TRE:CYP2E1 CYP2E1 PROTEIN (FRAGMENT). length=68;1e-33" "1367871_at RAE230A // 80.29% cytochrome P450, subfamily 2E, polypeptide 1 Putative Ortholog /// m30844_s_at Mu11KsubA // cytochrome P450, 2e1, ethanol inducible Curated Ortholog /// 93996_at MG-U74Av2 // cytochrome P450, 2e1, ethanol inducible Curated Ortholog /// Msa.27233.0_s_at Mu11KsubB // cytochrome P450, 2e1, ethanol inducible Curated Ortholog /// 1415994_at MOE430A // cytochrome P450, 2e1, ethanol inducible Curated Ortholog /// Msa.29934.0_s_at Mu11KsubB // cytochrome P450, 2e1, ethanol inducible Curated Ortholog /// 134363_at MG-U74Cv2 // cytochrome P450, 2e1, ethanol inducible Curated Ortholog" chr10q26.3 // 134477367-134482364 // + // 99 "Hs.75183 // 4 // NM_000773 // cytochrome P450, subfamily IIE (ethanol-inducible), polypeptide 1 // chr10 // 134470871-134482625 // +" 1438_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank X75208 X75208 /FEATURE=cds /DEFINITION=HSPTKR H.sapiens HEK2 mRNA for protein tyrosine kinase receptor X75208cds X75208cds --- EphB3 EPHB3 Chr:3q21-qter Hs.2913 2049 P54753 EC:2.7.1.112 601839 ENSG00000171690 --- NM_004443 // ephrin receptor EphB3 precursor 7165 // signal transduction // predicted/computed 5887 // integral to plasma membrane // predicted/computed 5003 // ephrin receptor // extended:inferred from electronic annotation; EPH_lbd; 1.1e-135 /// 4714 // transmembrane receptor protein tyrosine kinase // predicted/computed Receptor (signalling) // not recorded --- Integral membrane // not recorded --- --- --- --- "IPR001245 // Tyrosine protein kinase /// IPR001090 // Ephrin receptor, Eph /// IPR001660 // Sterile alpha motif SAM /// IPR003961 // Fibronectin, type III /// IPR001426 // Receptor tyrosine kinase, class V /// IPR003962 // Fibronectin, type III repeat /// IPR000345 // Cytochrome c heme-binding site /// IPR000719 // Eukaryotic protein kinase" SAM // SAM domain (Sterile alpha motif);8.4e-29 /// pkinase // Protein kinase domain;5e-75 /// fn3 // Fibronectin type III domain;2.8e-38 /// EPH_lbd // Ephrin receptor ligand binding domain;1.1e-135 IPB001060 // Cell division control protein 15 (CDC15);0.0072 d1nuka_ // b.18.1.4 // Ligand-binding domain of the ephb2 receptor tyrosine kinase ;2.11e-78 /// d1jpaa_ // d.144.1.2 // ephb2 receptor tyrosine kinase ;3.28e-75 /// d1b4fa_ // a.60.1.2 // EphB2 receptor ;6.81e-26 numtm:1;Nin-prob:0.02441;type:tm; EC:4.6.1.2 // HSER_HUMAN HEAT-STABLE ENTEROTOXIN RECEPTOR PRECURSOR (GC-C) (INTESTINAL GUANYLATE CYCLASE) (EC 4.6.1.2) (STA RECEPTOR).;1.05e-142 /// EC:2.7.1.112 // ZA70_HUMAN TYROSINE-PROTEIN KINASE ZAP-70 (EC 2.7.1.112) (70 KDA ZETA-ASSOCIATED PROTEIN) (SYK-RELATED TYROSINE KINASE).;4.39e-109 /// Hanks:HEK2 // S37627 (HEK2) KINASES:5.2.10 | PTK Group B membrane spanning protein tyrosine kinases.PTK XI Eph/Elk/Eck orphan receptor family .HEK2;1e-157 17975768 // ephrin receptor EphB3 precursor; human embryo kinase 2; EPH-like tyrosine kinase 2; tyrosine-protein kinase receptor HEK-2 [Homo sapiens];0.0 /// 1708164 // Ephrin type-B receptor 3 precursor (Tyrosine-protein kinase receptor HEK-2);0.0 Q91YM0 // HYPOTHETICAL 108.9 KDA PROTEIN. length=987;0 /// Q61821 // Gene-TRE:ELS1 ECK-LIKE SEQUENCE 1 (TYROSINE-PROTEIN KINASE RECEPTOR ELS1) (EC 2.7.1.112) (MRTK5) (FRAGMENT). length=57;1e-19 /// EPA4_BRARE // Gene:EK2 Gene:ZEK2 Ephrin type-A receptor 4 (EC 2.7.1.112) (Tyrosine-protein kinase receptor ZEK2) (EPH-like kinase 2) (Fragment). length=292;1e-127 /// Q62128 // Gene-TRE:EPHB2 Gene-TRE:PTK PROTEIN-TYROSINE KINASE (FRAGMENT). length=74;3e-30 /// O73877 // Gene-TRE:RTK7 EPH-LIKE RECEPTOR TYROSINE KINASE RTK7 (FRAGMENT). length=490;1e-168 /// Q60669 // Gene-TRE:EPHB3 PROTEIN KINASE (FRAGMENT). length=938;0 /// Q9H4H4 // Gene-TRE:EPHB2 DJ74M1.1.1 (TYROSINE KINASE ISOFORM 1) (FRAGMENT). length=552;0 /// Q99MR2 // Gene-TRE:EPHB4 EPHB4. length=987;0 /// EPB4_MOUSE // SW:Q60627 Gene:EPHB4 Gene:MDK2 Gene:MYK1 Gene:HTK EPHRIN TYPE-B RECEPTOR 4 PRECURSOR (EC 2.7.1.112) (TYROSINE-PROTEIN KINASE RECEPTOR MDK-2) (DEVELOPMENTAL KINASE 2) (TYROSINE KINASE MYK- 1). length=987;0 /// EPB3_HUMAN // Gene:EPHB3 Gene:ETK2 Gene:HEK2 EPHRIN TYPE-B RECEPTOR 3 PRECURSOR (EC 2.7.1.112) (TYROSINE-PROTEIN KINASE RECEPTOR HEK-2). length=998;0 /// Q9H4H3 // Gene-TRE:EPHB2 DJ74M1.1.2 (TYROSINE KINASE ISOSFORM 2) (FRAGMENT). length=621;0 /// Q62214 // Gene-TRE:EPHB3 Gene-TRE:SEK-4 EPH RECEPTOR B3 (SEK-4 MRNA) (FRAGMENT). length=275;1e-155 /// O73879 // Gene-TRE:RTK4 EPH-LIKE RECEPTOR TYROSINE KINASE RTK4 (FRAGMENT). length=880;0 93469_at MG-U74Av2 // Eph receptor B3 Curated Ortholog /// u11493_s_at Mu11KsubA // Eph receptor B3 Curated Ortholog /// 1451550_at MOE430A // Eph receptor B3 Curated Ortholog --- --- 1487_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank L38487 "L38487 /FEATURE=mRNA /DEFINITION=HUMHERRA1 Human estrogen receptor-related protein (hERRa1) mRNA, 3' end, partial cds" L38487mRNA L38487mRNA --- estrogen-related receptor alpha ESRRA Chr:11q13 Hs.110849 2101 P11474 /// Q8N4S8 /// Q96F89 /// Q96I02 --- 601998 --- --- NM_004451 // estrogen-related receptor alpha --- 5634 // nucleus // predicted/computed 3677 // DNA binding // predicted/computed /// 3700 // transcription factor // extended:inferred from electronic annotation; zf-C4; 3.1e-51 /// 4879 // ligand-dependent nuclear receptor // predicted/computed DNA-binding protein // experimental evidence Pol II transcription // experimental evidence DNA-associated (direct or indirect) // experimental evidence --- Nuclear // predicted/computed Nuclear_Receptors --- "IPR001628 // Zn-finger, C4-type steroid receptor /// IPR001723 // Steroid hormone receptor /// IPR000003 // Retinoid X receptor /// IPR000536 // Ligand-binding domain of nuclear hormone receptor /// IPR000515 // Binding-protein-dependent transport systems inner membrane component" "zf-C4 // Zinc finger, C4 type (two domains);3.1e-51 /// hormone_rec // Ligand-binding domain of nuclear hormone;4.5e-38" PR00350 // Vitamin D receptor signature;4e-09 d1qkna_ // a.123.1.1 // Estrogen receptor beta ;8.48e-60 --- --- "6166152 // Steroid hormone receptor ERR1 (Estrogen-related receptor, alpha) (ERR-alpha) (Estrogen receptor-like 1);0.0 /// 18860920 // estrogen-related receptor alpha; estrogen receptor-like 1 [Homo sapiens];0.0" "O42537 // Gene-TRE:ERR1 ERR1 (FRAGMENT). length=39;1e-16 /// Q96I02 // UNKNOWN (PROTEIN FOR IMAGE:4301880) (FRAGMENT). length=323;1e-178 /// O42538 // Gene-TRE:ERR2 ERR2 (FRAGMENT). length=39;5e-15 /// Q96F89 // UNKNOWN (PROTEIN FOR IMAGE:3855067) (FRAGMENT). length=55;1e-24 /// ERR1_MOUSE // Gene:ESRRA Gene:NR3B1 Gene:ERR1 Gene:ESTRRA STEROID HORMONE RECEPTOR ERR1 (ESTROGEN-RELATED RECEPTOR, ALPHA) (ERR-ALPHA) (ESTROGEN RECEPTOR-LIKE 1) (FRAGMENT). length=462;0" rc_AA955892_at RG-U34B // 89.22% EST Putative Ortholog chr11q13.1 // 65765174-65765715 // + // 99 Hs.110849 // 5 // NM_004451 // estrogen-related receptor alpha // chr11 // 65754597-65765764 // + 1494_f_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank M33318 "M33318 /FEATURE=mRNA /DEFINITION=HUMCPIIA3A Human cytochrome P450IIA3 (CYP2A3) mRNA, complete cds" M33318mRNA M33318mRNA 2010472 "cytochrome P450, subfamily IIA (phenobarbital-inducible), polypeptide 6" CYP2A6 Chr:19q13.2 Hs.334345 1548 P11509 EC:1.14.14.1 122720 ENSG00000171563 --- "NM_000762 // cytochrome P450, family 2, subfamily A, polypeptide 6" 6118 // electron transport // extended:Unknown; p450; 1.5e-192 5792 // microsome // experimental evidence 4497 // monooxygenase // experimental evidence /// 15034 // cytochrome P450 // experimental evidence /// 8389 // coumarin 7-hydroxylase // experimental evidence --- Other metabolism // not recorded --- --- Microsomal fraction // experimental evidence --- MAP00071 // Fatty acid metabolism /// MAP00361 // gamma-Hexachlorocyclohexane degradation /// MAP00380 // Tryptophan metabolism "IPR001128 // Cytochrome P450 /// IPR002401 // E-class P450, group I" p450 // Cytochrome P450;1.5e-192 IPB001128 // none;0.00056 d1dt6a_ // a.104.1.1 // Mammalian cytochrome p450 2c5 ;8.34e-134 numtm:1;Nin-prob:0.87542;type:signal; "EC:5.3.99.5 // THAS_HUMAN THROMBOXANE-A SYNTHASE (EC 5.3.99.5) (TXA SYNTHASE) (TXS).;2.28e-135 /// EC:1.1.3.34 // CP80_BERST BERBAMUNINE SYNTHASE (EC 1.1.3.34) (CYTOCHROME P450 80) (CYPLXXX) ((S)-N-METHYLCOCLAURINE OXIDASE [C-O PHENOL-COUPLING]).;1.78e-133 /// EC:4.2.1.92 // CP74_LINUS ALLENE OXIDE SYNTHASE PRECURSOR (EC 4.2.1.92) (HYDROPEROXIDE DEHYDRASE) (CYTOCHROME P450 74A).;3.76e-112 /// EC:1.14.13.11 // TCMO_ZINEL TRANS-CINNAMATE 4-MONOOXYGENASE (EC 1.14.13.11) (CINNAMIC ACID 4-HYDROXYLASE) (CA4H) (C4H) (P450C4H) (CYTOCHROME P450 73).;1.4e-140 /// EC:1.14.99.9 // CPT7_HUMAN CYTOCHROME P450 17 (EC 1.14.99.9) (CYPXVII) (P450-C17) (STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE).;2.33e-138 /// EC:1.14.15.4 // CPN2_HUMAN CYTOCHROME P450 11B2 PRECURSOR (EC 1.14.15.4) (CYPXIB2) (P-450ALDO) (ALDOSTERONE SYNTHASE) (ALDOS) (ALDOSTERONE-SYNTHESIZING ENZYME) (STEROID 18-HYDROXYLASE) (P-450C18).;5.05e-135 /// P450:S32491 // CYP2A-12 Cyt P450: Animalia.CYP2A-12.mou;0" "15147326 // cytochrome P450, subfamily IIA (phenobarbital-inducible), polypeptide 6; coumarin 7-hydroxylase; cytochrome P450, subfamily IIA (phenobarbital-inducible), polypeptide 3; xenobiotic monooxygenase; flavoprotein-linked monooxygenase [Homo sapiens];0.0 /// 65684 // coumarin 7-hydroxylase (EC 1.14.14.-) cytochrome P450 2A6 - human;0.0" "Q9WV19 // Gene-TRE:CYP2G1 OLFACTORY-SPECIFIC STEROID HYDROXYLASE. length=494;1e-170 /// CPA6_HUMAN // SW:P10890 SW:P00190 SW:Q16803 SW:Q9UK48 Gene:CYP2A6 Cytochrome P450 2A6 (EC 1.14.14.1) (CYPIIA6) (Coumarin 7-hydroxylase) (IIA3) (CYP2A3) (P450(I)). length=494;0 /// Q13120 // Gene-TRE:CYP2A6V2 CYTOCHROME P450. length=494;0 /// Q62802 // Gene-TRE:CYP2B15 CYTOCHROME P450 2B15 (FRAGMENT). length=104;2e-32 /// Q9H2X2 // CYTOCHROME P450 2A13. length=494;0 /// Q9UK48 // Gene-TRE:CYP2A6 CYTOCHROME P450-2A6 (EC 1.14.14.1). length=494;0 /// CPC9_HUMAN // Gene:CYP2C9 Cytochrome P450 2C9 (EC 1.14.14.1) (CYPIIC9) (P450 PB-1) (P450 MP-4) (S-mephenytoin 4-hydroxylase) (P-450MP). length=490;1e-139 /// Q9WUD0 // CYTOCHROME P450 2B10 RELATED PROTEIN. length=491;1e-155 /// Q9H1Z7 // Gene-TRE:CYP2A6 CYTOCHROME P450 2A6 (FRAGMENT). length=49;7e-20 /// Q9UQ59 // Gene-TRE:CYP2C9 CYTOCHROME P-450 2C (FRAGMENT). length=169;4e-48 /// CPG1_RAT // SW:Q64589 Gene:CYP2G1 Gene:CYP2G-1 Cytochrome P450 2G1 (EC 1.14.14.1) (CYPIIG1) (P450-OLF1) (Olfactive). length=494;1e-170 /// Q03738 // RAT CYTOCHROME P-450B TYPE E (FRAGMENT). length=48;9e-12 /// CPA4_MOUSE // Gene:CYP2A4 Gene:CYP2A-4 Cytochrome P450 2A4 (EC 1.14.14.1) (CYPIIA4) (Testosterone 15-alpha- hydroxylase) (P450-15-alpha) (P450-IIA3.1). length=494;0 /// CPA1_RAT // Gene:CYP2A1 Gene:CYP2A-1 Cytochrome P450 2A1 (EC 1.14.14.1) (CYPIIA1) (Steroid hormones 7- alpha-hydroxylase) (Testosterone 7-alpha-hydroxylase) (P450-UT-F). length=492;0 /// Q16872 // CYTOCHROME P-450. length=477;1e-136 /// Q63126 // RAT CYTOCHROME P-450B TYPE B (FRAGMENT). length=48;1e-11 /// CPB2_RAT // SW:Q64582 Gene:CYP2B2 Gene:CYP2B-2 Cytochrome P450 2B2 (EC 1.14.14.1) (CYPIIB2) (P450E) (P450 PB4). length=491;1e-158 /// Q91X75 // SIMILAR TO CYTOCHROME P450, 2A5. length=494;0 /// CPAC_MOUSE // Gene:CYP2A12 Cytochrome P450 2A12 (EC 1.14.14.1) (CYPIIA12) (Steroid hormones 7- alpha-hydroxylase) (Testosterone 7-alpha-hydroxylase). length=492;0 /// CPAD_HUMAN // SW:Q9H2X2 Gene:CYP2A13 Cytochrome P450 2A13 (EC 1.14.14.1) (CYPIIA13). length=494;0 /// Q64584 // RAT CYTOCHROME P-450B (PHENOBARBITAL-INDUCIBLE). length=491;1e-155 /// CPA5_MOUSE // Gene:CYP2A5 Gene:CYP2A-5 Cytochrome P450 2A5 (EC 1.14.14.1) (CYPIIA5) (Coumarin 7-hydroxylase) (P450-15-COH) (P450-IIA3.2). length=494;0 /// CPA7_HUMAN // SW:Q13121 Gene:CYP2A7 Cytochrome P450 2A7 (EC 1.14.14.1) (CYPIIA7) (P450-IIA4). length=494;0 /// Q8WZB1 // Gene-TRE:CYP2C19 S-MEPHENYTOIN 4-HYDROXYLASE (FRAGMENT). length=217;5e-67 /// CPA3_RAT // Gene:CYP2A3 Gene:CYP2A-3 Cytochrome P450 2A3 (EC 1.14.14.1) (CYPIIA3) (Coumarin 7-hydroxylase). length=494;0 /// Q8WW80 // SIMILAR TO CYTOCHROME P450, SUBFAMILY IIC (MEPHENYTOIN 4-HYDROXYLASE), POLYPEPTIDE 9. length=162;7e-45 /// Q64614 // CYTOCHROME P450PB-1 (FRAGMENT). length=169;2e-52 /// CPA2_RAT // Gene:CYP2A2 Gene:CYP2A-2 Cytochrome P450 2A2 (EC 1.14.14.1) (CYPIIA2) (Testosterone 15-alpha- hydroxylase) (P450-UT-4). length=492;0 /// Q63853 // CYTOCHROME P450 2C24 (FRAGMENT). length=70;2e-14 /// Q91XG2 // SIMILAR TO CYTOCHROME P450, 2A4. length=494;0 /// Q8VCW9 // SIMILAR TO CYTOCHROME P450 IIA1 (HEPATIC STEROID HYDROXYLASE IIA1) GENE. length=492;0 /// Q16756 // CYTOCHROME P-450 (FRAGMENT). length=487;1e-139 /// Q64579 // RAT CYTOCHROME P450E-L (P450IIB2) (FRAGMENT). length=395;1e-124" "1422230_s_at MOE430A // cytochrome P450, 2a5 Curated Ortholog" chr19q13.2 // 41741203-41742987 // - // 99 "Hs.334345 // 4 // NM_000762 // cytochrome P450, subfamily IIA (phenobarbital-inducible), polypeptide 6 // chr19 // 41741167-41748064 // -" 1598_g_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank L13720 "L13720 /FEATURE= /DEFINITION=HUMGAS Homo sapiens growth-arrest-specific protein (gas) mRNA, complete cds" L13720 L13720 2010428 nucleolar autoantigen (55kD) similar to rat synaptonemal complex protein SC65 Chr:17q21.2 Hs.207251 10609 AAH38984 /// Q14393 /// Q92791 --- --- --- --- NM_006455 // nucleolar autoantigen (55kD) similar to rat synaptonemal complex 7130 // synaptonemal complex formation // predicted/computed 5730 // nucleolus // experimental evidence /// 230 // nuclear mitotic chromosome // experimental evidence /// 5716 // synaptonemal complex // predicted/computed --- --- Chromatin/chromosome structure // predicted/computed DNA-associated (direct or indirect) // experimental evidence --- Nuclear // experimental evidence /// Nuclear nucleolus // experimental evidence --- --- "IPR000294 // Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain /// IPR002383 // Coagulation factor, Gla region /// IPR001881 // EGF-like calcium-binding /// IPR000152 // Aspartic acid and asparagine hydroxylation site /// IPR001791 // Laminin G /// IPR000561 // EGF-like domain" --- IPB003865 // Prolyl 4-hydroxylase alpha subunit C-terminus;0.001 --- --- --- 5454038 // nucleolar autoantigen (55kD) similar to rat synaptonemal complex [Homo sapiens];0.0 /// 11322247 // nucleolar protein No55 [Homo sapiens];0.0 Q14393 // Gene-TRE:GAS6 GROWTH-ARREST-SPECIFIC PROTEIN. length=678;0 rc_AI102871_at RG-U34C // 88.33% ESTs Putative Ortholog /// 1369805_at RAE230A // 88.33% SC65 synaptonemal complex protein Putative Ortholog /// 1388531_at RAE230A // 88.33% ESTs Putative Ortholog /// X65454_g_at RG-U34A // 88.33% SC65 synaptonemal complex protein Putative Ortholog /// X65454_at RG-U34A // 88.33% SC65 synaptonemal complex protein Putative Ortholog /// 1455288_at MOE430A // 86.87% RIKEN cDNA 1110036O03 gene Putative Ortholog /// 100471_at MG-U74Av2 // 86.87% RIKEN cDNA 1110036O03 gene Putative Ortholog /// aa028785_s_at Mu11KsubA // 86.87% RIKEN cDNA 1110036O03 gene Putative Ortholog --- --- 160020_at HG-U133A Homo sapiens 1-Mar-03 Consensus GenBank Z48481 Z48481 /FEATURE=cds /DEFINITION=HSMMPM1 H.sapiens mRNA for membrane-type matrix metalloproteinase 1 /NOTE=replacement of probe set 1301_s_at 4870053 4870053 --- matrix metalloproteinase 14 (membrane-inserted) MMP14 Chr:14q11-q12 Hs.2399 4323 P50281 EC:3.4.24 600754 ENSG00000157227 --- NM_004995 // matrix metalloproteinase 14 preproprotein 6508 // proteolysis and peptidolysis // experimental evidence 5887 // integral to plasma membrane // experimental evidence 4222 // metalloendopeptidase // experimental evidence /// 8270 // zinc binding // predicted/computed --- --- Integral membrane // not recorded Extracellular matrix maintenance // not recorded --- Matrix_Metalloproteinases --- "IPR001818 // Matrixin /// IPR006025 // Neutral zinc metallopeptidases, zinc-binding region /// IPR006026 // Neutral zinc metallopeptidase /// IPR000585 // Hemopexin repeat" "Peptidase_M10_N // Matrix metalloprotease, N-terminal do;3.1e-17 /// hemopexin // Hemopexin;3e-65 /// Peptidase_M10 // Matrixin;3.1e-43" "IPB000130 // Neutral zinc metallopeptidases, zinc-binding region;0.00011" "d1fbl_1 // b.66.1.1 // Collagenase, C-terminal domain ;2.57e-65 /// d1slm_1 // a.20.1.2 // Stromelysin-1 (MMP-3) ;6.53e-19 /// d1jk3a_ // d.92.1.11 // Macrophage elastase (MMP-12) ;3.09e-55" numtm:1;Nin-prob:0.03638;type:tm; EC:3.4.24.12 // HE_PARLI HATCHING ENZYME PRECURSOR (EC 3.4.24.12) (HE) (HEZ) (ENVELYSIN) (SEA-URCHIN-HATCHING PROTEINASE).;5.04e-170 4826834 // matrix metalloproteinase 14 preproprotein; membrane-type matrix metalloproteinase 1; membrane-type-1 matrix metalloproteinase [Homo sapiens];0.0 /// 2135759 // MT-MMP - human;0.0 MM14_MOUSE // SW:O08645 SW:O35369 Gene:MMP14 Gene:MTMMP Matrix metalloproteinase-14 precursor (EC 3.4.24.-) (MMP-14) (Membrane-type matrix metalloproteinase 1) (MT-MMP 1) (MTMMP1) (Membrane-type-1 matrix metalloproteinase) (MT1-MMP) (MT1MMP) (MMP- X1) (MT-MMP). length=582;0 /// MM14_RAT // Gene:MMP14 Gene:MTMMP Matrix metalloproteinase-14 precursor (EC 3.4.24.-) (MMP-14) (Membrane-type matrix metalloproteinase 1) (MT-MMP 1) (MTMMP1) (Membrane-type-1 matrix metalloproteinase) (MT1-MMP) (MT1MMP) (MT- MMP). length=582;0 /// O35369 // Gene-TRE:MMP14 MATRIX METALLOPROTEINASE-14. length=581;0 /// MM14_HUMAN // SW:Q92678 Gene:MMP14 Matrix metalloproteinase-14 precursor (EC 3.4.24.-) (MMP-14) (Membrane-type matrix metalloproteinase 1) (MT-MMP 1) (MTMMP1) (Membrane-type-1 matrix metalloproteinase) (MT1-MMP) (MT1MMP) (MMP- X1). length=582;0 /// Q9UHK5 // MATRIX METALLOPROTEINASE 1 (FRAGMENT). length=36;6e-12 /// O08645 // MEMBRANE-TYPE MATRIX METALLOPROTEINASE 1. length=582;0 "1367860_a_at RAE230A // 84.6% matrix metalloproteinase 14, membrane-inserted Putative Ortholog /// X83537_at RG-U34A // 84.6% matrix metalloproteinase 14, membrane-inserted Putative Ortholog /// rc_AI070584_at RG-U34C // 84.6% matrix metalloproteinase 14, membrane-inserted Putative Ortholog" chr14q11.2 // 17103582-17103912 // + // 100 Hs.2399 // 2 // NM_004995 // matrix metalloproteinase 14 (membrane-inserted) // chr14 // 17093093-17104104 // + 1729_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank L41690 "L41690 /FEATURE= /DEFINITION=HUMTRADD Homo sapiens TNF receptor-1 associated protein (TRADD) mRNA, 3' end of cds" L41690 L41690 --- TNFRSF1A-associated via death domain TRADD Chr:16q22 Hs.89862 8717 Q15628 --- 603500 --- --- NM_003789 // TNFRSF1A-associated via death domain isoform 1 /// NM_153425 // TNFRSF1A-associated via death domain isoform 2 7165 // signal transduction // experimental evidence /// 6917 // induction of apoptosis // experimental evidence --- --- Regulatory subunit // not recorded --- --- Cell death/Apoptosis // predicted/computed --- Apoptosis --- IPR000488 // Death domain death // Death domain;5.2e-15 --- "d1f3va_ // d.58.22.1 // TRADD, N-terminal domain ;3.78e-76 /// d1f3va_ // d.58.22.1 // TRADD, N-terminal domain ;6.98e-50" --- --- 808915 // tumor necrosis factor receptor type 1 associated protein;e-140 /// 13378137 // TNFRSF1A-associated via death domain isoform 1; tumor necrosis factor receptor-1-associated protein; TNFR1-associated death domain protein; tumor necrosis factor receptor type 1 associated death domain protein [Homo sapiens];e-140 /// 808915 // tumor necrosis factor receptor type 1 associated protein;e-175 /// 13378137 // TNFRSF1A-associated via death domain isoform 1; tumor necrosis factor receptor-1-associated protein; TNFR1-associated death domain protein; tumor necrosis factor receptor type 1 associated death domain protein [Homo sapiens];e-175 TRAD_HUMAN // Gene:TRADD Tumor necrosis factor receptor type 1 associated DEATH domain protein (TNFR1-associated DEATH domain protein) (TNFRSF1A-associated via death domain). length=312;1e-176 1439910_a_at MOE430B // 82.59% RIKEN cDNA 9130005N23 gene Putative Ortholog /// 1429117_at MOE430A // 82.59% RIKEN cDNA 9130005N23 gene Putative Ortholog /// 1452622_a_at MOE430A // 82.59% RIKEN cDNA 9130005N23 gene Putative Ortholog /// 136534_at MG-U74Cv2 // 82.59% RIKEN cDNA 9130005N23 gene Putative Ortholog /// 160689_r_at MG-U74Av2 // 82.59% RIKEN cDNA 9130005N23 gene Putative Ortholog /// 1446498_at MOE430B // 82.59% hypothetical protein E230031K19 Putative Ortholog --- --- 1773_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank L00635 "L00635 /FEATURE= /DEFINITION=HUMFPTB Human farnesyl-protein transferase beta-subunit mRNA, complete cds" L00635 L00635 --- "farnesyltransferase, CAAX box, beta" FNTB Chr:14q23-q24 Hs.276 2342 P49356 EC:2.5.1 134636 ENSG00000125954 --- "NM_002028 // farnesyltransferase, CAAX box, beta" 6503 // C-terminal protein farnesylation // experimental evidence 5737 // cytoplasm // not recorded 3824 // enzyme // extended:inferred from electronic annotation; prenyltrans; 4.5e-13 /// 4660 // protein farnesyltransferase // experimental evidence Transferase // experimental evidence --- --- --- Cytoplasmic // not recorded --- --- IPR001330 // Prenyltransferase/squalene oxidase prenyltrans // Prenyltransferase and squalene oxidase re;3.6e-69 IPB001330 // Prenyltransferase and squalene oxidase repeats;1.4e-05 "d1jcqb_ // a.102.4.3 // Protein farnesyltransferase, beta-subunit ;1.09e-152" --- "EC:5.4.99.8 // CAS1_ARATH CYCLOARTENOL SYNTHASE (EC 5.4.99.8) (2,3-EPOXYSQUALENE--CYCLOARTENOL CYCLASE).;1.24e-07" "10835059 // farnesyltransferase, CAAX box, beta [Homo sapiens];0.0 /// 266753 // Protein farnesyltransferase beta subunit (CAAX farnesyltransferase beta subunit) (RAS proteins prenyltransferase beta) (FTase-beta);0.0" PFTB_HUMAN // Gene:FNTB Protein farnesyltransferase beta subunit (EC 2.5.1.-) (CAAX farnesyltransferase beta subunit) (RAS proteins prenyltransferase beta) (FTase-beta). length=437;0 /// PFTB_RAT // Gene:FNTB Protein farnesyltransferase beta subunit (EC 2.5.1.-) (CAAX farnesyltransferase beta subunit) (RAS proteins prenyltransferase beta) (FTase-beta). length=437;0 rc_AI230914_at RG-U34A // 81.53% farnesyltransferase beta subunit Putative Ortholog /// 1370829_at RAE230A // 81.53% farnesyltransferase beta subunit Putative Ortholog /// rc_AI136396_at RG-U34A // 81.53% farnesyltransferase beta subunit Putative Ortholog chr14q23.3 // 59313632-59321811 // + // 100 "Hs.276 // 5 // NM_002028 // farnesyltransferase, CAAX box, beta // chr14 // 59247315-59323027 // +" 177_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank U38545 "U38545 /FEATURE= /DEFINITION=HSU38545 Human ARF-activated phosphatidylcholine-specific phospholipase D1a (hPLD1) mRNA, complete cds" U38545 U38545 --- "phospholipase D1, phophatidylcholine-specific" PLD1 Chr:3q26 Hs.82587 5337 Q13393 --- 602382 ENSG00000075651 --- "NM_002662 // phospholipase D1, phophatidylcholine-specific" 7242 // intracellular signaling cascade // extended:Unknown; PX; 1.2e-25 /// 7265 // RAS protein signal transduction // predicted/computed /// 7264 // small GTPase mediated signal transduction // experimental evidence /// 6935 // chemotaxis // predicted/computed /// 6644 // phospholipid metabolism // not recorded 16020 // membrane // experimental evidence 4630 // phospholipase D // experimental evidence Hydrolase // experimental evidence --- --- Cell migration/motility // predicted/computed Unspecified membrane // experimental evidence --- --- IPR001849 // Pleckstrin-like /// IPR001683 // Phox-like /// IPR001092 // Basic helix-loop-helix dimerization domain bHLH /// IPR001736 // Phospholipase D/Transphosphatidylase PX // PX domain;1.2e-25 /// PH // PH domain;1.7e-10 /// PLDc // Phospholipase D. Active site motif;1.8e-17 IPB001683 // PX (Bem1/NCF1/PI3K) domain;7e-05 d1f0ia1 // d.136.1.2 // Phospholipase D ;3.64e-08 --- EC:3.1.4.4 // PLD1_HUMAN PHOSPHOLIPASE D1 (EC 3.1.4.4) (PLD 1) (CHOLINE PHOSPHATASE 1) (PHOSPHATIDYLCHOLINE-HYDROLYZING PHOSPHOLIPASE D1).;1e-300 "7459633 // phospholipase D (EC 3.1.4.4) 1a - rat;0.0 /// 4505873 // phospholipase D1, phophatidylcholine-specific; phospholipase D1, phosphatidylcholine-specific [Homo sapiens];0.0" O54765 // PHOSPHOLIPASE D. length=1074;0 /// PLD1_RAT // SW:P70497 SW:O35856 SW:O54765 SW:O08959 SW:Q9QWJ6 Gene:PLD1 Phospholipase D1 (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D1) (rPLD1). length=1074;0 /// PLD1_MOUSE // SW:O35911 Gene:PLD1 Phospholipase D1 (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D1) (mPLD1). length=1074;0 /// O08959 // PHOSPHOLIPASE D (PHOSPHOLIPASE D 1). length=1036;0 /// O35856 // Gene-TRE:RPLD1 PHOSPHOLIPASE D. length=1036;0 /// PLD1_HUMAN // Gene:PLD1 Phospholipase D1 (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D1) (hPLD1). length=1074;0 /// O35911 // Gene-TRE:PLD1 Gene-TRE:MPLD1 PHOSPHATIDYLCHOLINE-SPECIFIC PHOSPHOLIPASE D1B. length=1035;0 1370531_a_at RAE230A // 84.62% Phoshpolipase D gene 1 Putative Ortholog /// 1370530_a_at RAE230A // 84.62% Phoshpolipase D gene 1 Putative Ortholog /// AF017251_at RG-U34A // 84.62% Phoshpolipase D gene 1 Putative Ortholog /// AB000778_s_at RG-U34A // 84.62% Phoshpolipase D gene 1 Putative Ortholog /// U69550_at RG-U34A // 84.62% Phoshpolipase D gene 1 Putative Ortholog /// 1370529_a_at RAE230A // 84.62% Phoshpolipase D gene 1 Putative Ortholog /// 1370532_at RAE230A // 84.62% Phoshpolipase D gene 1 Putative Ortholog /// AF017251_at RN-U34 // 84.62% Phoshpolipase D gene 1 Putative Ortholog /// 1370679_at RAE230A // 84.62% Phoshpolipase D gene 1 Putative Ortholog /// 1437113_s_at MOE430A // 85.76% hypothetical protein LOC229153 Putative Ortholog /// 92474_at MG-U74Av2 // 85.76% hypothetical protein LOC229153 Putative Ortholog /// 110715_at MG-U74Bv2 // 85.76% hypothetical protein LOC229153 Putative Ortholog /// 1437112_at MOE430A // 85.76% hypothetical protein LOC229153 Putative Ortholog /// 92475_g_at MG-U74Av2 // 85.76% hypothetical protein LOC229153 Putative Ortholog chr3q26.2 // 172277990-172280587 // - // 100 "Hs.82587 // 2 // NM_002662 // phospholipase D1, phophatidylcholine-specific // chr3 // 172277979-172485631 // -" 179_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank U38980 "U38980 /FEATURE= /DEFINITION=U38980 Human PMS2 related (hPMSR6) mRNA, complete cds" U38980 U38980 --- postmeiotic segregation increased 2-like 9 PMS2L9 Chr:7q11.23 Hs.180121 5387 Q13670 /// Q16603 /// Q8TAI9 --- --- ENSG00000127957 --- NM_005395 // postmeiotic segregation increased 2-like 9 --- --- 3676 // nucleic acid binding // extended:Unknown; KRAB; 1.6e-23 --- --- --- --- --- --- --- "IPR003594 // ATP-binding protein, ATPase-like" KRAB // KRAB box;1.6e-23 PR00344 // Bacterial sensor protein C-terminal signature;0.0048 --- --- --- 4239954 // PMS2L15 [Homo sapiens];8e-38 /// 4885553 // postmeiotic segregation increased 2-like 9 [Homo sapiens];e-154 Q9UDS2 // WUGSC:H_DJ0953A04.1A PROTEIN (FRAGMENT). length=114;2e-58 /// Q13670 // Gene-TRE:HPMSR6 HPMSR6. length=270;1e-161 --- chr7q11.23 // 75170271-75170442 // + // 90 Hs.180121 // 2 // BC015750 // postmeiotic segregation increased 2-like 9 // chr7 // 75145803-75216520 // + 1861_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank U66879 "U66879 /FEATURE= /DEFINITION=HSU66879 Human Bcl-2 binding component 6 (bbc6) mRNA, complete cds" U66879 U66879 --- BCL2-antagonist of cell death BAD Chr:11q12.3 Hs.76366 572 Q92934 --- 603167 ENSG00000002330 --- NM_004322 // BCL2-antagonist of cell death protein /// NM_032989 // BCL2-antagonist of cell death protein 8632 // apoptotic program // experimental evidence --- --- --- --- --- Cell death/Apoptosis // not recorded --- --- --- "IPR000712 // Apoptosis regulator Bcl-2 protein, BH" --- --- --- --- --- 1683637 // Bcl-2 binding component 6 [Homo sapiens];3e-78 /// 10835069 // BCL2-antagonist of cell death protein; BCL2-binding protein; BCL2-binding component 6; BCL-X/BCL-2 binding protein [Homo sapiens];7e-97 BAD_HUMAN // SW:O14803 Gene:BAD Gene:BBC6 Gene:BCL2L8 Bcl2-antagonist of cell death (BAD) (Bcl-2 binding component 6) (Bcl-XL/Bcl-2 associated death promoter). length=168;7e-79 /// O14803 // Gene-TRE:BAD BCL-X/BCL-2 BINDING PROTEIN (BCL2-ANTAGONIST OF CELL DEATH) (FRAGMENT). length=168;7e-79 "AF003523_s_at RT-U34 // 83.81% bcl-2 associated death agonist Putative Ortholog /// AF003523_s_at RN-U34 // 83.81% bcl-2 associated death agonist Putative Ortholog /// 1388952_at RAE230A // 83.81% ESTs, Moderately similar to hypothetical protein MGC4172 [Homo sapiens] [H.sapiens] Putative Ortholog /// 1386991_a_at RAE230A // 83.81% bcl-2 associated death agonist Putative Ortholog /// rc_AI172157_at RG-U34C // 83.81% ESTs, Moderately similar to hypothetical protein MGC4172 [Homo sapiens] [H.sapiens] Putative Ortholog /// rc_AA818072_s_at RG-U34A // 83.81% bcl-2 associated death agonist Putative Ortholog /// AF003523_s_at RG-U34A // 83.81% bcl-2 associated death agonist Putative Ortholog /// rc_AA818072_s_at RN-U34 // 83.81% bcl-2 associated death agonist Putative Ortholog /// 1436377_at MOE430B // 80.35% Bcl-associated death promoter Putative Ortholog /// 114524_at MG-U74Bv2 // 80.35% Bcl-associated death promoter Putative Ortholog /// 1416582_a_at MOE430A // 80.35% Bcl-associated death promoter Putative Ortholog /// 161500_i_at MG-U74Av2 // 80.35% Bcl-associated death promoter Putative Ortholog /// 1416583_at MOE430A // 80.35% Bcl-associated death promoter Putative Ortholog /// L37296_s_at Mu11KsubA // 80.35% Bcl-associated death promoter Putative Ortholog /// 107861_at MG-U74Bv2 // 80.35% Bcl-associated death promoter Putative Ortholog /// 99670_at MG-U74Av2 // 80.35% Bcl-associated death promoter Putative Ortholog" chr11q13.1 // 65720638-65720711 // - // 89 Hs.76366 // 6 // NM_004322 // BCL2-antagonist of cell death // chr11 // 65718855-65733635 // - /// Hs.76366 // 6 // NM_032989 // BCL2-antagonist of cell death // chr11 // 65718855-65733718 // - 200000_s_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_006445.1 "gb:NM_006445.1 /DEF=Homo sapiens U5 snRNP-specific protein (220 kD), ortholog of S. cerevisiae Prp8p (PRP8), mRNA. /FEA=mRNA /GEN=PRP8 /PROD=U5 snRNP-specific protein (220 kD), ortholog ofS. cerevisiae Prp8p /DB_XREF=gi:5453983 /UG=Hs.181368 U5 snRNP-specific protein (220 kD), ortholog of S. cerevisiae Prp8p /FL=gb:AB007510.1 gb:AF092565.1 gb:NM_006445.1" g5453983 Hs.181368.0 "1500074332 (2 transcripts, 2 gene clusters)" PRP8 pre-mRNA processing factor 8 homolog (yeast) PRPF8 Chr:17p13.3 Hs.181368 10594 O14547 /// O75965 /// Q9BW78 --- --- --- --- NM_006445 // U5 snRNP-specific protein 6371 // mRNA splicing // predicted/computed /// 6397 // mRNA processing // predicted/computed 5634 // nucleus // not recorded /// 5682 // snRNP U5 // experimental evidence 8248 // pre-mRNA splicing factor // predicted/computed RNA-binding protein // predicted/computed /// Spliceosomal subunit // experimental evidence RNA processing/modification // experimental evidence /// RNA splicing // experimental evidence RNA-associated // experimental evidence --- Nuclear // predicted/computed --- --- IPR000555 // Mov34 family Mov34 // Mov34/MPN/PAD-1 family;1.3e-26 --- --- --- --- "2463577 // PRP8 protein [Homo sapiens];0.0 /// 17999537 // U5 snRNP-specific protein; U5 snRNP-specific protein (220 kD), ortholog of S. cerevisiae Prp8p; precursor mRNA processing protein; splicing factor Prp8 [Homo sapiens];0.0" Q99PV0 // Gene-TRE:PRP8 PRE-MRNA PROCESSING 8 PROTEIN. length=2335;0 /// O14547 // Gene-TRE:HPRP8 PRP8 PROTEIN. length=2335;0 /// O75965 // SPLICING FACTOR PRP8. length=2335;0 rc_AA859532_at RG-U34A // 86.58% EST Putative Ortholog /// 1386452_at RAE230A // 86.58% EST Putative Ortholog /// 168106_at MG-U74Cv2 // pre-mRNA processing factor 8 Curated Ortholog /// 1422453_at MOE430A // pre-mRNA processing factor 8 Curated Ortholog /// aa155321_g_at Mu11KsubA // pre-mRNA processing factor 8 Curated Ortholog /// aa155321_at Mu11KsubA // pre-mRNA processing factor 8 Curated Ortholog /// 98574_at MG-U74Av2 // pre-mRNA processing factor 8 Curated Ortholog chr17p13.3 // 1889639-1890386 // - // 99 Hs.181368 // 5 // NM_006445 // PRP8 pre-mRNA processing factor 8 homolog (yeast) // chr17 // 1889546-1923792 // - 200001_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_001749.1 "gb:NM_001749.1 /DEF=Homo sapiens calpain 4, small subunit (30K) (CAPN4), mRNA. /FEA=mRNA /GEN=CAPN4 /PROD=calpain 4 small subunit /DB_XREF=gi:4502564 /UG=Hs.74451 calpain 4, small subunit (30K) /FL=gb:BC000592.1 gb:NM_001749.1" g4502564 Hs.74451.0 --- "calpain, small subunit 1" CAPNS1 Chr:19q13.12 Hs.74451 826 AAH17308 /// AAH18931 /// P04632 /// Q96EW0 --- --- ENSG00000126247 --- "NM_001749 // calpain, small subunit 1" 8284 // positive regulation of cell proliferation // experimental evidence --- 5509 // calcium ion binding // extended:inferred from electronic annotation; fhand; 0.14 /// 4198 // calpain // predicted/computed Regulatory subunit // not recorded Protein degradation // not recorded --- --- --- --- --- IPR002048 // Calcium-binding EF-hand efhand // EF hand;5.4e-09 IPB003474 // GntP family permease;0.0088 "d1df0a1 // a.39.1.7 // Calpain large subunit, C-terminal domain (domain IV) ;1.52e-56" --- --- "4502565 // calpain, small subunit 1; calpain, small polypeptide; calcium-dependent protease, small subunit; calcium-activated neutral proteinase; calpain 4, small subunit (30K) [Homo sapiens];e-156 /// 18314496 // calpain, small subunit 1 [Homo sapiens];e-156" "Q9BQC8 // CALPAIN 3, (P94) (UNKNOWN) (PROTEIN FOR MGC:10767). length=156;3e-50 /// P97572 // Gene-TRE:CSS1 CALPAIN SMALL SUBUNIT (EC 3.4.22.17) (FRAGMENT). length=266;1e-144 /// CANS_MOUSE // Gene:CAPNS1 Gene:CAPN4 Calcium-dependent protease, small subunit (Calpain regulatory subunit) (Calcium-activated neutral proteinase) (CANP). length=269;1e-146 /// Q9R1C5 // CALPAIN SMALL SUBUNIT (FRAGMENT). length=170;9e-93 /// CANS_RAT // SW:P97572 Gene:CAPNS1 Gene:CAPN4 Gene:CSS1 Calcium-dependent protease, small subunit (Calpain regulatory subunit) (Calcium-activated neutral proteinase) (CANP) (Fragment). length=266;1e-144 /// Q96L46 // Gene-TRE:CAPNS2 CALPAIN SMALL SUBUNIT 2. length=248;2e-92 /// Q9D7J7 // Gene-TRE:2310005G05RIK 2310005G05RIK PROTEIN. length=247;2e-92 /// Q9BPV4 // SIMILAR TO RIKEN CDNA 2310005G05 GENE. length=248;7e-93 /// CANS_HUMAN // SW:Q8WTX3 Gene:CAPNS1 Gene:CAPN4 Gene:CAPNS Calcium-dependent protease, small subunit (Calpain regulatory subunit) (Calcium-activated neutral proteinase) (CANP). length=268;1e-157 /// Q8WTX3 // CALPAIN, SMALL SUBUNIT 1. length=268;1e-157 /// Q8VEK4 // SIMILAR TO CALPAIN 4. length=268;1e-146" "rc_AI230702_at RG-U34C // ESTs, Highly similar to hematological and neurological expressed sequence 1 [Mus musculus] [M.musculus] Curated Ortholog /// rc_AA891935_at RG-U34A // calpain, small subunit 1 Curated Ortholog /// 1388581_at RAE230A // ESTs, Highly similar to hematological and neurological expressed sequence 1 [Mus musculus] [M.musculus] Curated Ortholog /// 1367462_at RAE230A // calpain, small subunit 1 Curated Ortholog /// rc_AI235780_at RG-U34C // calpain, small subunit 1 Curated Ortholog /// rc_AA892814_s_at RN-U34 // calpain, small subunit 1 Curated Ortholog /// rc_AI236570_s_at RG-U34C // calpain, small subunit 1 Curated Ortholog /// 1398936_at RAE230A // calpain, small subunit 1 Curated Ortholog /// 1371336_at RAE230A // ESTs, Highly similar to hematological and neurological expressed sequence 1 [Mus musculus] [M.musculus] Curated Ortholog /// rc_AA942716_at RG-U34B // ESTs, Highly similar to hematological and neurological expressed sequence 1 [Mus musculus] [M.musculus] Curated Ortholog /// rc_AA964422_f_at RG-U34B // calpain, small subunit 1 Curated Ortholog /// U53859_g_at RG-U34A // calpain, small subunit 1 Curated Ortholog /// U53859_at RN-U34 // calpain, small subunit 1 Curated Ortholog /// U53859_at RG-U34A // calpain, small subunit 1 Curated Ortholog /// rc_AI236570_s_at RN-U34 // calpain, small subunit 1 Curated Ortholog /// U53859_g_at RN-U34 // calpain, small subunit 1 Curated Ortholog /// rc_AA892814_s_at RG-U34A // calpain, small subunit 1 Curated Ortholog /// Msa.42827.0_s_at Mu11KsubB // calpain, small subunit 1 Curated Ortholog /// 1426400_a_at MOE430A // calpain, small subunit 1 Curated Ortholog /// 165397_f_at MG-U74Bv2 // calpain, small subunit 1 Curated Ortholog /// Msa.33146.0_f_at Mu11KsubB // calpain, small subunit 1 Curated Ortholog /// 100610_at MG-U74Av2 // calpain, small subunit 1 Curated Ortholog /// aa646384_at Mu11KsubA // calpain, small subunit 1 Curated Ortholog /// Msa.3944.0_f_at Mu11KsubB // calpain, small subunit 1 Curated Ortholog /// Msa.27359.0_f_at Mu11KsubB // calpain, small subunit 1 Curated Ortholog" chr19q13.12 // 37089435-37090159 // + // 99 "Hs.74451 // 10 // NM_001749 // calpain, small subunit 1 // chr19 // 37079872-37090211 // +" 200002_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_007209.1 "gb:NM_007209.1 /DEF=Homo sapiens ribosomal protein L35 (RPL35), mRNA. /FEA=mRNA /GEN=RPL35 /PROD=ribosomal protein L35 /DB_XREF=gi:6005859 /UG=Hs.182825 ribosomal protein L35 /FL=gb:BC000348.1 gb:U12465.1 gb:NM_007209.1" g6005859 Hs.182825.0 --- ribosomal protein L35 RPL35 Chr:9q34.1 Hs.182825 11224 P42766 /// Q96QJ7 --- --- ENSG00000136942 --- NM_007209 // ribosomal protein L35 6412 // protein biosynthesis // experimental evidence 5730 // nucleolus // experimental evidence /// 5842 // cytosolic large ribosomal subunit (sensu Eukarya) // experimental evidence 3729 // mRNA binding // experimental evidence /// 3735 // structural protein of ribosome // experimental evidence RNA-binding protein // not recorded /// Ribosomal subunit // not recorded Protein synthesis // not recorded Ribosome-associated // not recorded General cellular role // not recorded Cytoplasmic // not recorded --- --- IPR001854 // Ribosomal protein L29 Ribosomal_L29 // Ribosomal L29 protein;1.7e-15 IPB001854 // Ribosomal protein L29;1.9e-27 --- --- --- 6005860 // ribosomal protein L35; 60S ribosomal protein L35 [Homo sapiens];2e-62 /// 15012043 // Similar to ribosomal protein L35 [Homo sapiens];5e-62 Q9W499 // Gene-TRE:CG4111 CG4111 PROTEIN. length=121;4e-37 /// RL35_HUMAN // Gene:RPL35 60S ribosomal protein L35. length=122;1e-62 /// RL35_CAEEL // Gene:RPL-35 Gene:ZK652.4 60S ribosomal protein L35. length=123;1e-40 /// Q96QJ7 // SIMILAR TO RIBOSOMAL PROTEIN L35. length=123;7e-63 /// Q9M3D2 // Gene-TRE:T26I12.50 RIBOSOMAL PROTEIN L35-LIKE. length=123;2e-38 /// RL35_YEAST // SW:P39930 Gene:RPL35A Gene:SOS1 Gene:YDL191W Gene:D1249 Gene:RPL35B Gene:SOS2 Gene:YDL136W OR Gene:D2170 60S RIBOSOMAL PROTEIN L35. length=120;4e-31 /// Q9SF53 // Gene-TRE:F11F8_7 PUTATIVE 60S RIBOSOMAL PROTEIN L35. length=123;2e-38 /// RL35_RAT // Gene:RPL35 60S RIBOSOMAL PROTEIN L35. length=122;6e-62 /// Q9LZ41 // Gene-TRE:T22P11_200 RIBOSOMAL PROTEIN L35-LIKE. length=123;1e-38 /// O80626 // Gene-TRE:AT2G39390 Gene-TRE:F12L6.5/AT2G39390 60S RIBOSOMAL PROTEIN L35 (PUTATIVE 60S RIBOSOMAL PROTEIN L35). length=123;2e-38 --- chr9q33.3 // 119269031-119270756 // - // 100 Hs.182825 // 4 // NM_007209 // ribosomal protein L35 // chr9 // 119266712-119270790 // - 200003_s_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_000991.1 "gb:NM_000991.1 /DEF=Homo sapiens ribosomal protein L28 (RPL28), mRNA. /FEA=mRNA /GEN=RPL28 /PROD=ribosomal protein L28 /DB_XREF=gi:4506626 /UG=Hs.4437 ribosomal protein L28 /FL=gb:BC000072.1 gb:NM_000991.1 gb:U14969.1" g4506626 Hs.4437.0 "1500074333 (2 transcripts, 2 gene clusters)" ribosomal protein L28 RPL28 Chr:19q13.4 Hs.356371 6158 P46779 --- --- --- --- NM_000991 // ribosomal protein L28 6412 // protein biosynthesis // predicted/computed 5842 // cytosolic large ribosomal subunit (sensu Eukarya) // predicted/computed 3735 // structural protein of ribosome // predicted/computed /// 3723 // RNA binding // predicted/computed RNA-binding protein // predicted/computed /// Ribosomal subunit // predicted/computed Protein synthesis // predicted/computed Ribosome-associated // predicted/computed General cellular role // predicted/computed Cytoplasmic // predicted/computed --- --- IPR002672 // Ribosomal L28e protein Ribosomal_L28e // Ribosomal L28e protein family;4.1e-79 IPB002672 // Ribosomal L28e protein family;4.1e-82 --- --- --- 14603467 // Unknown (protein for MGC:20328) [Homo sapiens];3e-72 /// 13904866 // ribosomal protein L28; 60S ribosomal protein L28 [Homo sapiens];1e-72 Q9BWQ0 // RIBOSOMAL PROTEIN L28 (UNKNOWN) (PROTEIN FOR MGC:20378) (PROTEIN FOR MGC:20081). length=137;6e-73 /// RL28_RAT // Gene:RPL28 60S RIBOSOMAL PROTEIN L28. length=136;6e-70 /// Q96FX1 // UNKNOWN (PROTEIN FOR MGC:20328). length=137;1e-72 /// RL28_MOUSE // Gene:RPL28 60S RIBOSOMAL PROTEIN L28. length=136;8e-72 /// RL28_HUMAN // SW:Q9BWQ0 SW:Q96FX1 Gene:RPL28 60S ribosomal protein L28. length=136;2e-72 /// O60251 // RIBOSOMAL PROTEIN L28 (FRAGMENT). length=53;1e-22 --- chr19q13.42 // 56322344-56324228 // + // 100 Hs.356371 // 7 // NM_000991 // ribosomal protein L28 // chr19 // 56321902-56324344 // + 200004_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_001418.1 "gb:NM_001418.1 /DEF=Homo sapiens eukaryotic translation initiation factor 4 gamma, 2 (EIF4G2), mRNA. /FEA=mRNA /GEN=EIF4G2 /PROD=eukaryotic translation initiation factor 4gamma, 2 /DB_XREF=gi:4503538 /UG=Hs.183684 eukaryotic translation initiation factor 4 gamma, 2 /FL=gb:U73824.1 gb:U76111.1 gb:NM_001418.1" g4503538 Hs.183684.0 --- "eukaryotic translation initiation factor 4 gamma, 2" EIF4G2 Chr:11p15 Hs.183684 1982 P78344 /// Q8NI71 /// Q96C16 --- --- ENSG00000110321 --- "NM_001418 // eukaryotic translation initiation factor 4 gamma, 2" 7050 // cell cycle arrest // predicted/computed /// 6445 // regulation of translation // experimental evidence /// 8219 // cell death // predicted/computed 8304 // eukaryotic translation initiation factor 4 complex // experimental evidence "3723 // RNA binding // extended:inferred from electronic annotation; MIF4G; 4.6e-63 /// 8135 // translation factor, nucleic acid binding // experimental evidence" RNA-binding protein // predicted/computed Protein synthesis // experimental evidence Protein synthesis factor // experimental evidence General cellular role // experimental evidence Cytoplasmic // predicted/computed --- --- "IPR000504 // RNA-binding region RNP-1 (RNA recognition motif) /// IPR003890 // Initiation factor eIF-4 gamma, middle /// IPR003891 // Initiation factor eIF-4 gamma, MA3 /// IPR003307 // eIF4-gamma/eIF5/eIF2-epsilon" MA3 // MA3 domain;4.2e-37 /// MIF4G // MIF4G domain;4.6e-63 /// W2 // eIF4-gamma/eIF5/eIF2-epsilon;2.9e-33 IPB003890 // Middle domain of eIF4G;1.2e-05 d1hu3a_ // a.118.1.2 // Eukaryotic initiation factor eIF4G ;8.91e-70 --- --- "3218320 // death associated protein 5 [Homo sapiens];0.0 /// 4503539 // eukaryotic translation initiation factor 4 gamma, 2; Eukaryotic translation initiation factor 4G-like 1; p97 [Homo sapiens];0.0" Q62448 // TRE:P97867 Gene-TRE:EIF4G2 EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2 (TRANSLATION REPRESSOR NAT1). length=907;0 /// P78344 // TRE:O60877 TRE:P78404 Gene-TRE:EIF4G2 Gene-TRE:DAP5 Gene-TRE:DAP-5 EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2 (P97) (DEATH ASSOCIATED PROTEIN 5) (DAP-5) (TRANSLATION REPRESSOR NAT1). length=907;0 /// Q921U3 // UNKNOWN (PROTEIN FOR IMAGE:3598196) (FRAGMENT). length=113;1e-60 --- chr11p15.4 // 11388870-11389241 // - // 100 "Hs.183684 // 8 // NM_001418 // eukaryotic translation initiation factor 4 gamma, 2 // chr11 // 11388723-11400594 // -" 200005_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_003753.1 "gb:NM_003753.1 /DEF=Homo sapiens eukaryotic translation initiation factor 3, subunit 7 (zeta, 6667kD) (EIF3S7), mRNA. /FEA=mRNA /GEN=EIF3S7 /PROD=eukaryotic translation initiation factor 3,subunit 7 (zeta, 6667kD) /DB_XREF=gi:4503522 /UG=Hs.55682 eukaryotic translation initiation factor 3, subunit 7 (zeta, 6667kD) /FL=gb:BC000328.1 gb:BC000469.1 gb:U54558.1 gb:NM_003753.1" g4503522 Hs.55682.0 --- "eukaryotic translation initiation factor 3, subunit 7 zeta, 66/67kDa" EIF3S7 Chr:22q13.1 Hs.55682 8664 O15371 --- --- ENSG00000100353 --- NM_003753 // eukaryotic translation initiation factor 3 subunit 7 6446 // regulation of translational initiation // predicted/computed 5852 // eukaryotic translation initiation factor 3 complex // predicted/computed 3743 // translation initiation factor // predicted/computed --- Protein synthesis // predicted/computed Protein synthesis factor // predicted/computed --- Cytoplasmic // predicted/computed Translation_Factors --- --- --- IPB001580 // Calreticulin family;0.0019 --- --- --- "4503523 // eukaryotic translation initiation factor 3 subunit 7; translation initiation factor eIF3 p66 subunit [Homo sapiens];0.0 /// 20343895 // eukaryotic translation initiation factor 3, subunit 7 (zeta, 66/ [Mus musculus];0.0" IF37_HUMAN // Gene:EIF3S7 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66). length=548;0 /// IF37_MOUSE // Gene:EIF3S7 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66) (eIF3d). length=547;0 "1393232_at RAE230B // 89.89% ESTs, Weakly similar to MT1_RAT METALLOTHIONEIN-I (MT-I) [R.norvegicus] Putative Ortholog /// rc_AA819204_at RG-U34C // 89.89% ESTs, Weakly similar to MT1_RAT METALLOTHIONEIN-I (MT-I) [R.norvegicus] Putative Ortholog /// 1446997_at MOE430B // eukaryotic translation initiation factor 3, subunit 7 (zeta) Curated Ortholog /// 165354_r_at MG-U74Bv2 // eukaryotic translation initiation factor 3, subunit 7 (zeta) Curated Ortholog /// 99101_at MG-U74Av2 // eukaryotic translation initiation factor 3, subunit 7 (zeta) Curated Ortholog /// 1416100_at MOE430A // eukaryotic translation initiation factor 3, subunit 7 (zeta) Curated Ortholog /// Z31134_s_at Mu11KsubB // eukaryotic translation initiation factor 3, subunit 7 (zeta) Curated Ortholog" chr22q12.3 // 33521476-33523181 // - // 92 --- 200006_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_007262.1 "gb:NM_007262.1 /DEF=Homo sapiens RNA-binding protein regulatory subunit (DJ-1), mRNA. /FEA=mRNA /GEN=DJ-1 /PROD=RNA-binding protein regulatory subunit /DB_XREF=gi:6005748 /UG=Hs.10958 RNA-binding protein regulatory subunit /FL=gb:AF021819.1 gb:NM_007262.1 gb:D61380.1" g6005748 Hs.10958.0 --- RNA-binding protein regulatory subunit DJ-1 Chr:1p36.33-p36.12 Hs.10958 11315 O14805 /// Q99497 --- --- ENSG00000116288 --- NM_007262 // RNA-binding protein regulatory subunit 7265 // RAS protein signal transduction // predicted/computed 5737 // cytoplasm // experimental evidence /// 5634 // nucleus // experimental evidence --- --- --- --- --- Cytoplasmic // experimental evidence /// Nuclear // experimental evidence --- --- IPR002818 // Family of unknown function ThiJ/PfpI DJ-1_PfpI // DJ-1/PfpI family;6.1e-57 IPB002818 // ThiJ/PfpI family;3.8e-12 d1g2ia_ // c.23.16.2 // Intracellular protease ;7.62e-37 --- --- 2460318 // RNA-binding protein regulatory subunit [Homo sapiens];e-100 /// 6005749 // RNA-binding protein regulatory subunit [Homo sapiens];e-102 O14805 // Gene-TRE:BK215D11.1 RNA-BINDING PROTEIN REGULATORY SUBUNIT (UNKNOWN) (PROTEIN FOR MGC:5243). length=189;1e-101 /// O88767 // Gene-TRE:CAP1 CAP1 PROTEIN. length=189;1e-94 /// Q99LX0 // SIMILAR TO DJ-1 PROTEIN. length=189;3e-93 /// Q99497 // Gene-TRE:DJ-1 DJ-1 PROTEIN. length=189;1e-102 /// O88306 // Gene-TRE:DJ1 Gene-TRE:DJ-1 DJ-1. length=173;7e-85 AJ007291_at RG-U34A // 84.67% fertility protein SP22 Putative Ortholog /// 1368653_a_at RAE230A // 84.67% fertility protein SP22 Putative Ortholog /// AJ007291_g_at RG-U34A // 84.67% fertility protein SP22 Putative Ortholog /// 95491_at MG-U74Av2 // RNA binding protein regulatory subunit Curated Ortholog /// 1416526_a_at MOE430A // RNA binding protein regulatory subunit Curated Ortholog /// w45916_s_at Mu11KsubB // RNA binding protein regulatory subunit Curated Ortholog /// 1456194_a_at MOE430A // RNA binding protein regulatory subunit Curated Ortholog chr1p36.23 // 7846665-7854225 // + // 100 Hs.10958 // 4 // NM_007262 // RNA-binding protein regulatory subunit // chr1 // 7831754-7854257 // + 200007_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_003134.1 "gb:NM_003134.1 /DEF=Homo sapiens signal recognition particle 14kD (homologous Alu RNA-binding protein) (SRP14), mRNA. /FEA=mRNA /GEN=SRP14 /PROD=signal recognition particle 14kD (homologous AluRNA-binding protein) /DB_XREF=gi:4507210 /UG=Hs.180394 signal recognition particle 14kD (homologous Alu RNA-binding protein) /FL=gb:NM_003134.1 gb:U07857.1" g4507210 Hs.180394.0 --- signal recognition particle 14kDa (homologous Alu RNA binding protein) SRP14 Chr:15q22 Hs.180394 6727 AAH35495 /// P37108 /// Q96Q14 --- --- ENSG00000140319 --- NM_003134 // signal recognition particle 14kDa (homologous Alu RNA binding protein) 6613 // co-translational membrane targeting // predicted/computed 5737 // cytoplasm // experimental evidence /// 5786 // signal recognition particle // predicted/computed 8312 // 7S RNA binding // experimental evidence /// 3723 // RNA binding // predicted/computed RNA-binding protein // experimental evidence Protein translocation // predicted/computed RNA-associated // experimental evidence --- Cytoplasmic // predicted/computed --- --- "IPR000104 // Antifreeze protein, type I /// IPR003210 // Signal recognition particle, 14 kDa protein" SRP14 // Signal recognition particle 14kD protein;4.1e-61 PR00833 // Pollen allergen Poa pI signature;0.0025 "d1914__ // d.49.1.1 // Signal recognition particle alu RNA binding heterodimer, SRP9/14 ;4.56e-49" --- --- 4507211 // signal recognition particle 14kDa (homologous Alu RNA binding protein); signal recognition particle 14kD (homologous Alu RNA-binding protein); signal recognition particle 14kD (homologous Alu RNA binding protein) [Homo sapiens];5e-70 /// 1082198 // Alu RNA-binding protein - human;2e-69 SR14_MOUSE // Gene:SRP14 Signal recognition particle 14 kDa protein (SRP14). length=110;1e-51 /// SR14_HUMAN // Gene:SRP14 SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN (SRP14) (18 KDA ALU RNA BINDING PROTEIN). length=136;2e-70 /// Q96Q14 // Gene-TRE:SRP14 SIGNAL RECOGNITION PARTICLE 14KD. length=136;7e-70 1455939_x_at MOE430A // signal recognition particle 14 kDa (homologous Alu RNA binding protein) Curated Ortholog /// 162477_r_at MG-U74Av2 // signal recognition particle 14 kDa (homologous Alu RNA binding protein) Curated Ortholog /// 1454615_x_at MOE430A // signal recognition particle 14 kDa (homologous Alu RNA binding protein) Curated Ortholog /// 101519_at MG-U74Av2 // signal recognition particle 14 kDa (homologous Alu RNA binding protein) Curated Ortholog /// M29264_f_at Mu11KsubA // signal recognition particle 14 kDa (homologous Alu RNA binding protein) Curated Ortholog /// 1418567_a_at MOE430A // signal recognition particle 14 kDa (homologous Alu RNA binding protein) Curated Ortholog /// 1418568_x_at MOE430A // signal recognition particle 14 kDa (homologous Alu RNA binding protein) Curated Ortholog --- --- 200008_s_at HG-U133A Homo sapiens 1-Mar-03 Exemplar GenBank D13988.1 "gb:D13988.1 /DEF=Human rab GDI mRNA, complete cds. /FEA=mRNA /PROD=human rab GDI /DB_XREF=gi:285974 /UG=Hs.56845 GDP dissociation inhibitor 2 /FL=gb:BC005145.1 gb:D13988.1 gb:NM_001494.2" g285974 Hs.56845.0 "1500074334 (1 transcript, 1 gene cluster)" GDP dissociation inhibitor 2 GDI2 Chr:10p15 Hs.56845 2665 P50395 /// Q8TB95 --- --- ENSG00000057608 --- NM_001494 // GDP dissociation inhibitor 2 6899 // non-selective vesicle transport // predicted/computed --- 5097 // RAB GTPase activator // extended:Unknown; GDI; 0 /// 5093 // RAB GDP-dissociation inhibitor // predicted/computed Inhibitor or repressor // experimental evidence --- --- --- --- --- --- IPR002005 // Rab GTPase activator /// IPR000806 // Rab GDI protein GDI // GDP dissociation inhibitor;0 IPB000172 // Glucose-methanol-choline (GMC) oxidoreductase;0.0013 "d1d5ta2 // d.16.1.6 // Guanine nucleotide dissosiation inhibitor, GDI ;3.23e-45 /// d1d5ta1 // c.3.1.3 // Guanine nucleotide dissosiation inhibitor, GDI ;1.11e-138" --- EC:5.4.99.9 // GLF_MYCPN UDP-GALACTOPYRANOSE MUTASE (EC 5.4.99.9).;6.81e-37 "6598323 // GDP dissociation inhibitor 2; rab GDP-dissociation inhibitor, beta [Homo sapiens];0.0 /// 285975 // human rab GDI [Homo sapiens];0.0" Q96CX5 // HYPOTHETICAL 50.5 KDA PROTEIN. length=447;0 /// Q91Z41 // HYPOTHETICAL 10.5 KDA PROTEIN (FRAGMENT). length=93;1e-34 /// GDIC_MOUSE // SW:Q9D8M9 Gene:GDI3 RAB GDP DISSOCIATION INHIBITOR BETA-2 (RAB GDI BETA-2) (GDI-3). length=445;0 /// Q9UQM6 // RAB GDP DISSOCIATION INHIBITOR BETA (FRAGMENT). length=359;0 /// Q9VLB7 // Gene-TRE:GDI Gene-TRE:CG4422 GDI PROTEIN. length=443;1e-174 /// O43928 // GDP DISSOCIATION INHIBITOR BETA. length=445;0 /// GDIA_MOUSE // SW:Q91Y71 Gene:GDI1 Gene:RABGDIA Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (GDI-1). length=447;0 /// GDIB_HUMAN // SW:O43928 SW:Q9UQM6 Gene:GDI2 Gene:RABGDIB Rab GDP dissociation inhibitor beta (Rab GDI beta) (GDI-2). length=445;0 /// Q8VHM3 // GUANOSINE DIPHOSPHATE DISSOCIATION INHIBITOR 1. length=447;0 /// Q9R274 // RAB GDP DISSOCIATION INHIBITOR ALPHA (FRAGMENT). length=359;0 /// Q91Y71 // RAB GDP DISSOCIATION INHIBITOR ALPHA. length=447;0 /// GDIA_RAT // SW:Q9R274 Gene:GDI1 Gene:RABGDIA RAB GDP DISSOCIATION INHIBITOR ALPHA (RAB GDI ALPHA) (GDI-1). length=447;0 /// GDIB_RAT // Gene:GDI2 Gene:RABGDIB RAB GDP DISSOCIATION INHIBITOR BETA (RAB GDI BETA) (GDI-2). length=445;0 /// GDIA_HUMAN // SW:P50394 Gene:GDI1 Gene:RABGDIA Gene:XAP4 Gene:OPHN2 Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (GDI-1) (XAP-4) (Oligophrenin 2). length=447;0 /// GDIB_MOUSE // Gene:GDI2 Gene:RABGDIB RAB GDP DISSOCIATION INHIBITOR BETA (RAB GDI BETA) (GDI-2). length=445;0 1398822_at RAE230A // 88.86% guanosine diphosphate dissociation inhibitor 3 Putative Ortholog /// 1367460_at RAE230A // 88.86% guanosine diphosphate dissociation inhibitor 3 Putative Ortholog /// rc_AI105149_at RG-U34C // 88.86% guanosine diphosphate dissociation inhibitor 3 Putative Ortholog /// X74401_at RG-U34A // 88.86% guanosine diphosphate dissociation inhibitor 3 Putative Ortholog /// Msa.3107.0_i_at Mu11KsubB // guanosine diphosphate (GDP) dissociation inhibitor 2 Curated Ortholog /// Msa.3107.0_f_at Mu11KsubB // guanosine diphosphate (GDP) dissociation inhibitor 2 Curated Ortholog /// 94642_at MG-U74Av2 // guanosine diphosphate (GDP) dissociation inhibitor 2 Curated Ortholog /// 1421742_at MOE430A // guanosine diphosphate (GDP) dissociation inhibitor 2 Curated Ortholog chr10p15.1 // 5772361-5774634 // - // 100 Hs.56845 // 7 // NM_001494 // GDP dissociation inhibitor 2 // chr10 // 5771475-5819663 // - 200009_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_001494.2 "gb:NM_001494.2 /DEF=Homo sapiens GDP dissociation inhibitor 2 (GDI2), mRNA. /FEA=mRNA /GEN=GDI2 /PROD=GDP dissociation inhibitor 2 /DB_XREF=gi:6598322 /UG=Hs.56845 GDP dissociation inhibitor 2 /FL=gb:BC005145.1 gb:D13988.1 gb:NM_001494.2" g6598322 Hs.56845.0 --- GDP dissociation inhibitor 2 GDI2 Chr:10p15 Hs.56845 2665 P50395 /// Q8TB95 --- --- ENSG00000057608 --- NM_001494 // GDP dissociation inhibitor 2 6899 // non-selective vesicle transport // predicted/computed --- 5097 // RAB GTPase activator // extended:Unknown; GDI; 0 /// 5093 // RAB GDP-dissociation inhibitor // predicted/computed Inhibitor or repressor // experimental evidence --- --- --- --- --- --- IPR002005 // Rab GTPase activator /// IPR000806 // Rab GDI protein GDI // GDP dissociation inhibitor;0 IPB000172 // Glucose-methanol-choline (GMC) oxidoreductase;0.0013 "d1d5ta2 // d.16.1.6 // Guanine nucleotide dissosiation inhibitor, GDI ;3.23e-45 /// d1d5ta1 // c.3.1.3 // Guanine nucleotide dissosiation inhibitor, GDI ;1.11e-138" --- EC:5.4.99.9 // GLF_MYCPN UDP-GALACTOPYRANOSE MUTASE (EC 5.4.99.9).;6.81e-37 "6598323 // GDP dissociation inhibitor 2; rab GDP-dissociation inhibitor, beta [Homo sapiens];0.0 /// 285975 // human rab GDI [Homo sapiens];0.0" Q91Z41 // HYPOTHETICAL 10.5 KDA PROTEIN (FRAGMENT). length=93;2e-34 /// Q96CX5 // HYPOTHETICAL 50.5 KDA PROTEIN. length=447;0 /// GDIC_MOUSE // SW:Q9D8M9 Gene:GDI3 RAB GDP DISSOCIATION INHIBITOR BETA-2 (RAB GDI BETA-2) (GDI-3). length=445;0 /// Q9UQM6 // RAB GDP DISSOCIATION INHIBITOR BETA (FRAGMENT). length=359;0 /// Q9VLB7 // Gene-TRE:GDI Gene-TRE:CG4422 GDI PROTEIN. length=443;1e-175 /// O43928 // GDP DISSOCIATION INHIBITOR BETA. length=445;0 /// GDIA_MOUSE // SW:Q91Y71 Gene:GDI1 Gene:RABGDIA Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (GDI-1). length=447;0 /// GDIB_HUMAN // SW:O43928 SW:Q9UQM6 Gene:GDI2 Gene:RABGDIB Rab GDP dissociation inhibitor beta (Rab GDI beta) (GDI-2). length=445;0 /// Q8VHM3 // GUANOSINE DIPHOSPHATE DISSOCIATION INHIBITOR 1. length=447;0 /// Q9R274 // RAB GDP DISSOCIATION INHIBITOR ALPHA (FRAGMENT). length=359;0 /// Q91Y71 // RAB GDP DISSOCIATION INHIBITOR ALPHA. length=447;0 /// GDIA_RAT // SW:Q9R274 Gene:GDI1 Gene:RABGDIA RAB GDP DISSOCIATION INHIBITOR ALPHA (RAB GDI ALPHA) (GDI-1). length=447;0 /// GDIB_RAT // Gene:GDI2 Gene:RABGDIB RAB GDP DISSOCIATION INHIBITOR BETA (RAB GDI BETA) (GDI-2). length=445;0 /// GDIA_HUMAN // SW:P50394 Gene:GDI1 Gene:RABGDIA Gene:XAP4 Gene:OPHN2 Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (GDI-1) (XAP-4) (Oligophrenin 2). length=447;0 /// GDIB_MOUSE // Gene:GDI2 Gene:RABGDIB RAB GDP DISSOCIATION INHIBITOR BETA (RAB GDI BETA) (GDI-2). length=445;0 1398822_at RAE230A // 88.86% guanosine diphosphate dissociation inhibitor 3 Putative Ortholog /// 1367460_at RAE230A // 88.86% guanosine diphosphate dissociation inhibitor 3 Putative Ortholog /// rc_AI105149_at RG-U34C // 88.86% guanosine diphosphate dissociation inhibitor 3 Putative Ortholog /// X74401_at RG-U34A // 88.86% guanosine diphosphate dissociation inhibitor 3 Putative Ortholog /// Msa.3107.0_i_at Mu11KsubB // guanosine diphosphate (GDP) dissociation inhibitor 2 Curated Ortholog /// Msa.3107.0_f_at Mu11KsubB // guanosine diphosphate (GDP) dissociation inhibitor 2 Curated Ortholog /// 94642_at MG-U74Av2 // guanosine diphosphate (GDP) dissociation inhibitor 2 Curated Ortholog /// 1421742_at MOE430A // guanosine diphosphate (GDP) dissociation inhibitor 2 Curated Ortholog chr10p15.1 // 5771517-5772075 // - // 99 Hs.56845 // 5 // NM_001494 // GDP dissociation inhibitor 2 // chr10 // 5771475-5819663 // - 200010_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_000975.1 "gb:NM_000975.1 /DEF=Homo sapiens ribosomal protein L11 (RPL11), mRNA. /FEA=mRNA /GEN=RPL11 /PROD=ribosomal protein L11 /DB_XREF=gi:4506594 /UG=Hs.179943 ribosomal protein L11 /FL=gb:L05092.1 gb:NM_000975.1" g4506594 Hs.179943.0 --- ribosomal protein L11 RPL11 Chr:1p36.1-p35 Hs.388664 6135 P39026 /// Q8TDH2 /// Q9Y674 --- --- ENSG00000142676 --- NM_000975 // ribosomal protein L11 6412 // protein biosynthesis // predicted/computed 5842 // cytosolic large ribosomal subunit (sensu Eukarya) // predicted/computed 3735 // structural protein of ribosome // predicted/computed /// 3723 // RNA binding // predicted/computed RNA-binding protein // not recorded /// Ribosomal subunit // not recorded Protein synthesis // not recorded Ribosome-associated // not recorded General cellular role // not recorded --- --- --- IPR002132 // Ribosomal protein L5 Ribosomal_L5_C // ribosomal L5P family C-terminus;8.9e-60 /// Ribosomal_L5 // Ribosomal protein L5;6e-23 IPB002132 // Ribosomal protein L5;4.7e-44 d1jj2d_ // d.77.1.1 // Ribosomal protein L5 ;6.66e-61 --- --- 22001905 // 60S ribosomal protein L11;8e-99 /// 13385408 // RIKEN cDNA 2010203J19 [Mus musculus];e-99 Q8VC94 // HYPOTHETICAL 19.0 KDA PROTEIN. length=167;2e-91 /// RL11_MOUSE // Gene:RPL11 60S ribosomal protein L11. length=177;1e-96 /// Q9Y674 // RIBOSOMAL PROTEIN L11. length=177;2e-96 /// RL11_HUMAN // SW:P25121 Gene:RPL11 60S RIBOSOMAL PROTEIN L11. length=177;4e-98 /// RL11_HUMAN // SW:P25121 Gene:RPL11 60S RIBOSOMAL PROTEIN L11. length=177;2e-97 1417615_a_at MOE430A // RIKEN cDNA 2010203J19 gene Curated Ortholog chr1p36.11 // 23090094-23092257 // + // 98 Hs.388664 // 5 // NM_000975 // ribosomal protein L11 // chr1 // 23090083-23093901 // + 200011_s_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_001659.1 "gb:NM_001659.1 /DEF=Homo sapiens ADP-ribosylation factor 3 (ARF3), mRNA. /FEA=mRNA /GEN=ARF3 /PROD=ADP-ribosylation factor 3 /DB_XREF=gi:4502202 /UG=Hs.119177 ADP-ribosylation factor 3 /FL=gb:M74491.1 gb:NM_001659.1" g4502202 Hs.119177.0 "1500074335 (1 transcript, 1 gene cluster)" ADP-ribosylation factor 3 ARF3 Chr:12q13 Hs.119177 377 AAH28402 /// AAM12596 /// P16587 --- --- ENSG00000134287 --- NM_001659 // ADP-ribosylation factor 3 6902 // non-selective vesicle assembly // predicted/computed --- 3924 // GTPase // experimental evidence /// 5525 // GTP binding // predicted/computed GTP-binding protein/GTPase // not recorded /// Hydrolase // not recorded /// Activator // not recorded --- --- --- --- --- --- IPR000251 // ADP-ribosylation factor family /// IPR005225 // Small GTP-binding protein domain /// IPR001806 // Ras GTPase superfamily /// IPR002046 // GTP-binding protein SAR1 arf // ADP-ribosylation factor family;6.9e-127 PR00449 // Transforming protein P21 RAS signature;0.0022 d1rrga_ // c.37.1.8 // ADP-ribosylation factor ;1.72e-57 --- --- 4502203 // ADP-ribosylation factor 3 [Homo sapiens];e-101 /// 4502201 // ADP-ribosylation factor 1 [Homo sapiens];2e-97 ARF3_DROME // SW:Q9V7B0 Gene:ARF51F Gene:ARF3 Gene:CG8156 ADP-ribosylation factor 3. length=174;4e-68 /// ARF1_HUMAN // SW:P10947 Gene:ARF1 ADP-ribosylation factor 1. length=180;3e-97 /// ARF1_ARATH // Gene:ARF1 Gene:AT2G47170 Gene:T08I13.1 ADP-RIBOSYLATION FACTOR 1. length=180;2e-86 /// Q9DD04 // Gene-TRE:ARF4 ADP-RIBOSYLATION FACTOR 4. length=181;1e-79 /// ARF2_ARATH // SW:Q9SGY6 Gene:AT1G10630 Gene:F20B24.7 Gene:AT1G70490 Gene:F24J13.6 ADP-RIBOSYLATION FACTOR 1-LIKE. length=180;1e-85 /// Q9V499 // Gene-TRE:ARF102F ARF102F PROTEIN. length=180;2e-80 /// Q9M1P5 // Gene-TRE:T17J13.250 ADP-RIBOSYLATION FACTOR-LIKE PROTEIN (AT3G62290/T17J13_250). length=181;9e-88 /// Q9FZ18 // Gene-TRE:T6A9.12 T6A9.12 PROTEIN. length=186;2e-41 /// ARF4_MOUSE // Gene:ARF4 ADP-RIBOSYLATION FACTOR 4. length=179;1e-79 /// ARF3_CAEEL // Gene:ARL-6 Gene:F45E4.1 ADP-RIBOSYLATION FACTOR 3. length=178;2e-55 /// ARF6_HUMAN // Gene:ARF6 ADP-ribosylation factor 6. length=174;1e-69 /// ARF1_HUMAN // SW:P10947 Gene:ARF1 ADP-ribosylation factor 1. length=180;6e-97 /// ARL1_YEAST // Gene:ARL1 Gene:ARF3 Gene:YBR164C Gene:YBR1216 ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 1. length=183;3e-55 /// Q9D7H9 // Gene-TRE:2310008D22RIK 2310008D22RIK PROTEIN. length=181;3e-57 /// ARF4_MOUSE // Gene:ARF4 ADP-RIBOSYLATION FACTOR 4. length=179;4e-79 /// Q9VSG8 // Gene-TRE:CG7197 CG7197 PROTEIN. length=179;9e-49 /// O45099 // Gene-TRE:F57H12.1 F57H12.1 PROTEIN. length=180;2e-83 /// ARF3_HUMAN // Gene:ARF3 ADP-ribosylation factor 3. length=180;1e-101 /// ARF3_ARATH // Gene:ARF3 Gene:AT2G24765 Gene:F27A10.8 Gene:F27C12.31 ADP-ribosylation factor 3. length=181;1e-59 /// ARF3_HUMAN // Gene:ARF3 ADP-ribosylation factor 3. length=180;1e-100 /// Q9VNQ2 // Gene-TRE:ARF79F Gene-TRE:LARF1 ARF79F PROTEIN (ADP-RIBOSYLATION FACTOR 1). length=182;1e-95 /// ARF6_HUMAN // Gene:ARF6 ADP-ribosylation factor 6. length=174;3e-70 /// ARF2_MOUSE // SW:P10947 Gene:ARF2 ADP-RIBOSYLATION FACTOR 2. length=181;6e-96 /// ARL1_MOUSE // Gene:ARL1 Gene:ARF7 ADP-ribosylation factor-like protein 1. length=181;7e-57 /// Q9CXX3 // Gene-TRE:ARF4 ADP-RIBOSYLATION FACTOR 4. length=180;2e-79 /// ARF1_YEAST // Gene:ARF1 Gene:YDL192W Gene:D1244 ADP-RIBOSYLATION FACTOR 1. length=180;4e-78 /// Q9V7B0 // Gene-TRE:ARF51F Gene-TRE:CG8156 ARF51F PROTEIN. length=175;4e-68 /// ARL1_MOUSE // Gene:ARL1 Gene:ARF7 ADP-ribosylation factor-like protein 1. length=181;3e-57 /// ARF1_HUMAN // SW:P10947 Gene:ARF1 ADP-ribosylation factor 1. length=180;1e-97 /// ARF1_DROME // SW:Q9VNQ2 Gene:ARF79F Gene:ARF1 Gene:LARF1 Gene:CG8385 ADP-ribosylation factor 1. length=181;5e-95 /// ARF2_MOUSE // SW:P10947 Gene:ARF2 ADP-RIBOSYLATION FACTOR 2. length=181;2e-95 /// Q9LIK1 // Gene-TRE:AT3G22950 SIMILARITY TO ADP-RIBOSYLATION FACTOR (PUTATIVE ADP-RIBOSYLATION FACTOR). length=183;4e-52 /// Q9U2S4 // Gene-TRE:Y116A8C.12 Y116A8C.12 PROTEIN. length=175;3e-66 /// ARF1_CAEEL // Gene:ARF-1 Gene:B0336.2 ADP-RIBOSYLATION FACTOR 1. length=180;7e-94 /// ARF2_DROME // SW:Q9V499 Gene:ARF102F Gene:ARF2 Gene:CG11027 ADP-RIBOSYLATION FACTOR 2. length=179;6e-80 /// ARL1_HUMAN // SW:P80417 Gene:ARL1 ADP-ribosylation factor-like protein 1. length=181;6e-57 /// ARF4_HUMAN // SW:P21371 Gene:ARF4 ADP-ribosylation factor 4. length=179;5e-79 /// ARF6_HUMAN // Gene:ARF6 ADP-ribosylation factor 6. length=174;2e-69 /// Q91VR9 // SIMILAR TO ADP-RIBOSYLATION FACTOR 2. length=181;7e-94 L12382_at RG-U34A // 88.92% ADP-ribosylation factor 3 Putative Ortholog /// 1387447_at RAE230A // 88.92% ADP-ribosylation factor 3 Putative Ortholog /// 1437331_a_at MOE430A // ADP-ribosylation factor 3 Curated Ortholog /// 1421789_s_at MOE430A // ADP-ribosylation factor 3 Curated Ortholog /// 93700_at MG-U74Av2 // ADP-ribosylation factor 3 Curated Ortholog /// Msa.3060.0_s_at Mu11KsubB // ADP-ribosylation factor 3 Curated Ortholog /// 96587_at MG-U74Av2 // ADP-ribosylation factor 3 Curated Ortholog /// 1423973_a_at MOE430A // ADP-ribosylation factor 3 Curated Ortholog chr12q13.12 // 49556600-49557134 // - // 100 Hs.119177 // 5 // NM_001659 // ADP-ribosylation factor 3 // chr12 // 49556548-49561530 // - 200012_x_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_000982.1 "gb:NM_000982.1 /DEF=Homo sapiens ribosomal protein L21 (gene or pseudogene) (RPL21), mRNA. /FEA=mRNA /GEN=RPL21 /PROD=ribosomal protein L21 (gene or pseudogene) /DB_XREF=gi:4506610 /UG=Hs.184108 ribosomal protein L21 /FL=gb:BC001603.1 gb:NM_000982.1 gb:U14967.1 gb:U25789.1" g4506610 Hs.184108.0 "1500074336 (24 transcripts, 21 gene clusters)" ribosomal protein L21 RPL21 Chr:13q12.13 Hs.350077 6144 P46778 --- --- ENSG00000122516 /// ENSG00000122026 /// ENSG00000162767 /// ENSG00000138174 --- NM_000982 // ribosomal protein L21 6412 // protein biosynthesis // predicted/computed 5842 // cytosolic large ribosomal subunit (sensu Eukarya) // predicted/computed 3735 // structural protein of ribosome // predicted/computed /// 3723 // RNA binding // predicted/computed RNA-binding protein // predicted/computed /// Ribosomal subunit // predicted/computed Protein synthesis // predicted/computed Ribosome-associated // predicted/computed General cellular role // predicted/computed Cytoplasmic // predicted/computed --- --- IPR001147 // Ribosomal protein L21e Ribosomal_L21e // Ribosomal protein L21e;2.7e-69 IPB001147 // Ribosomal protein L21E;2.5e-45 d1jj2p_ // b.34.5.1 // Ribosomal proteins L21e ;9.96e-31 --- --- "20891506 // similar to data source:MGD, source key:MGI:1278340, evidence:ISS~putative~ribosomal protein L21 [Mus musculus];2e-90 /// 18104948 // ribosomal protein L21; 60S ribosomal protein L21 [Homo sapiens];2e-90" Q9UDT4 // Gene-TRE:WUGSC:H_RG095A14.1 RIBOSOMAL PROTEIN L21. length=160;4e-86 /// RL21_HUMAN // SW:Q16699 Gene:RPL21 60S ribosomal protein L21. length=159;6e-86 /// Q9CQM8 // Gene-TRE:RPL21 Gene-TRE:8430440E03RIK RIBOSOMAL PROTEIN L21. length=160;1e-86 /// RL21_MOUSE // Gene:RPL21 60S RIBOSOMAL PROTEIN L21. length=159;4e-85 /// RL21_CAEEL // Gene:RPL-21 Gene:C14B9.7 60S ribosomal protein L21. length=160;2e-49 /// R21B_YEAST // Gene:RPL21B Gene:YPL079W Gene:LPF6W 60S ribosomal protein L21-B. length=160;3e-49 /// R21A_YEAST // Gene:RPL21A Gene:URP1 Gene:YBR191W Gene:YBR1401 60S RIBOSOMAL PROTEIN L21-A. length=160;2e-49 /// Q9V9M7 // Gene-TRE:CG12775 RIBOSOMAL PROTEIN L21. length=159;6e-62 /// RL21_RAT // Gene:RPL21 60S RIBOSOMAL PROTEIN L21. length=159;4e-85 "M27905_at RG-U34A // ribosomal protein L21 Curated Ortholog /// rc_AA849648_at RG-U34A // ribosomal protein L21 Curated Ortholog /// rc_AA849648_g_at RG-U34A // ribosomal protein L21 Curated Ortholog /// rc_AI231127_at RG-U34C // ESTs, Moderately similar to transforming growth factor, beta induced, 68 kDa [Mus musculus] [M.musculus] Curated Ortholog /// rc_AI070653_at RG-U34C // ribosomal protein L21 Curated Ortholog /// 1398764_at RAE230A // ribosomal protein L21 Curated Ortholog /// 1371913_at RAE230A // ESTs, Moderately similar to transforming growth factor, beta induced, 68 kDa [Mus musculus] [M.musculus] Curated Ortholog /// 1429077_x_at MOE430A // ribosomal protein L21 Curated Ortholog /// 96290_f_at MG-U74Av2 // ribosomal protein L21 Curated Ortholog /// 1423070_at MOE430A // ribosomal protein L21 Curated Ortholog /// U93863_s_at Mu11KsubA // ribosomal protein L21 Curated Ortholog /// 1455767_x_at MOE430A // ribosomal protein L21 Curated Ortholog /// 1459002_at MOE430B // ribosomal protein L21 Curated Ortholog /// 133729_at MG-U74Cv2 // ribosomal protein L21 Curated Ortholog" chr1q32.3 // 208068081-208068578 // - // 98 /// chr10q26.12 // 121357856-121358353 // - // 98 /// chr12q21.2 // 77396528-77397025 // + // 97 /// chr13q12.2 // 21807898-21810653 // + // 97 /// chr16p13.2 // 9349872-9350369 // - // 98 /// chr4q28.1 // 129013396-129013893 // - // 97 /// chr7p21.1 // 19686707-19687204 // + // 98 Hs.350077 // 4 // NM_000982 // ribosomal protein L21 // chr7 // 19686701-19687258 // + 200013_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_000986.1 "gb:NM_000986.1 /DEF=Homo sapiens ribosomal protein L24 (RPL24), mRNA. /FEA=mRNA /GEN=RPL24 /PROD=ribosomal protein L24 /DB_XREF=gi:4506618 /UG=Hs.184582 ribosomal protein L24 /FL=gb:BC000690.1 gb:M94314.1 gb:NM_000986.1" g4506618 Hs.184582.0 --- ribosomal protein L24 RPL24 Chr:3q12 Hs.184582 6152 P38663 --- --- ENSG00000114391 --- NM_000986 // ribosomal protein L24 6412 // protein biosynthesis // predicted/computed 5842 // cytosolic large ribosomal subunit (sensu Eukarya) // predicted/computed 3735 // structural protein of ribosome // predicted/computed /// 3723 // RNA binding // predicted/computed RNA-binding protein // predicted/computed /// Ribosomal subunit // predicted/computed Protein synthesis // predicted/computed Ribosome-associated // predicted/computed General cellular role // predicted/computed Cytoplasmic // predicted/computed --- --- IPR000988 // Ribosomal protein L24E Ribosomal_L24e // Ribosomal protein L24e;5.4e-50 IPB001380 // Ribosomal protein L13e;0.0022 --- --- --- 20977585 // 60S ribosomal protein L24 [Danio rerio];7e-76 /// 4506619 // ribosomal protein L24; 60S ribosomal protein L24; ribosomal protein L30 [Homo sapiens];4e-84 Q9VJY6 // Gene-TRE:CG9282 CG9282 PROTEIN. length=155;8e-55 /// RL24_HUMAN // Gene:RPL24 60S ribosomal protein L24 (L30). length=157;1e-85 /// RL24_HUMAN // Gene:RPL24 60S ribosomal protein L24 (L30). length=157;3e-85 /// RL24_HUMAN // Gene:RPL24 60S ribosomal protein L24 (L30). length=157;5e-85 /// Q9CS31 // Gene-TRE:0610008L05RIK 0610008L05RIK PROTEIN (FRAGMENT). length=67;3e-35 rc_AA859318_at RG-U34C // 89.73% ribosomal protein L24 Putative Ortholog /// 1396812_at RAE230B // 89.73% ribosomal protein L24 Putative Ortholog /// rc_AA817997_at RG-U34A // 89.73% ribosomal protein L24 Putative Ortholog /// rc_AA817997_g_at RG-U34A // 89.73% ribosomal protein L24 Putative Ortholog /// 1398854_at RAE230A // 89.73% ribosomal protein L24 Putative Ortholog /// 168684_i_at MG-U74Cv2 // ribosomal protein L24 Curated Ortholog /// w97389_at Mu11KsubB // ribosomal protein L24 Curated Ortholog /// 1447653_x_at MOE430A // ribosomal protein L24 Curated Ortholog /// 161127_i_at MG-U74Av2 // ribosomal protein L24 Curated Ortholog /// 1460201_a_at MOE430A // ribosomal protein L24 Curated Ortholog chr3q12.3 // 100831303-100835239 // - // 98 /// chr6p21.1 // 42920544-42920909 // - // 98 --- 200014_s_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_004500.1 "gb:NM_004500.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1C2) (HNRPC), mRNA. /FEA=mRNA /GEN=HNRPC /PROD=heterogeneous nuclear ribonucleoprotein C(C1C2) /DB_XREF=gi:4758543 /UG=Hs.182447 heterogeneous nuclear ribonucleoprotein C (C1C2) /FL=gb:BC003394.1 gb:M16342.1 gb:NM_004500.1" g4758543 Hs.182447.0 "1500074337 (2 transcripts, 1 gene cluster)" heterogeneous nuclear ribonucleoprotein C (C1/C2) HNRPC Chr:14q11.1 Hs.406125 3183 P07910 --- --- ENSG00000092199 --- NM_004500 // heterogeneous nuclear ribonucleoprotein C isoform b /// NM_031314 // heterogeneous nuclear ribonucleoprotein C isoform a 6371 // mRNA splicing // predicted/computed 5634 // nucleus // predicted/computed 3723 // RNA binding // not recorded /// 8436 // heterogeneous nuclear ribonucleoprotein // not recorded /// 3676 // nucleic acid binding // extended:Unknown; rrm; 3.1e-16 RNA-binding protein // not recorded RNA processing/modification // predicted/computed /// RNA splicing // predicted/computed RNA-associated // not recorded --- Nuclear // predicted/computed --- --- IPR000504 // RNA-binding region RNP-1 (RNA recognition motif) "rrm // RNA recognition motif. (a.k.a. RRM, RBD, or;3.1e-16" --- --- --- --- "4758544 // heterogeneous nuclear ribonucleoprotein C, isoform b; nuclear ribonucleoprotein particle C1 protein; nuclear ribonucleoprotein particle C2 protein [Homo sapiens];e-162 /// 20455507 // Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2);e-169 /// 14110428 // heterogeneous nuclear ribonucleoprotein C, isoform a; nuclear ribonucleoprotein particle C1 protein; nuclear ribonucleoprotein particle C2 protein [Homo sapiens];e-170 /// 13097279 // heterogeneous nuclear ribonucleoprotein C (C1/C2) [Homo sapiens];e-161" Q96HK7 // HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN C (C1/C2). length=306;1e-159 /// Q99KE2 // Gene-TRE:HNRPC HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN C. length=292;1e-153 /// ROCL_HUMAN // Gene:dJ845O24.4 Heterogeneous nuclear ribonucleoprotein C-like (hnRNP core protein C- like). length=293;1e-146 /// Q96HM4 // HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN C (C1/C2). length=293;1e-161 /// Q9CY83 // Gene-TRE:HNRPC Gene-TRE:HNRNPC HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN C. length=293;1e-156 /// Q9CQT3 // Gene-TRE:HNRPC Gene-TRE:HNRNPC HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN C. length=300;1e-154 /// ROC_MOUSE // SW:Q9CY83 SW:Q9CQT3 Gene:HNRPC Gene:HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2). length=313;1e-151 /// Q9BTS3 // HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN C (C1/C2). length=293;1e-161 /// ROC_HUMAN // SW:P22628 SW:Q96IY5 SW:Q96HK7 SW:Q96HM4 SW:Q9BTS3 Gene:HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2). length=306;1e-159 /// Q96IY5 // SIMILAR TO HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN C. length=306;1e-158 rc_AI233740_at RG-U34C // 83.89% aldose reductase-like protein Putative Ortholog /// 1370902_at RAE230A // 83.89% aldose reductase-like protein Putative Ortholog /// C80267_rc_f_at Mu11KsubA // heterogeneous nuclear ribonucleoprotein C Curated Ortholog /// aa543665_i_at Mu11KsubA // heterogeneous nuclear ribonucleoprotein C Curated Ortholog /// 1460240_a_at MOE430A // heterogeneous nuclear ribonucleoprotein C Curated Ortholog /// aa674148_at Mu11KsubA // heterogeneous nuclear ribonucleoprotein C Curated Ortholog /// 165278_r_at MG-U74Bv2 // heterogeneous nuclear ribonucleoprotein C Curated Ortholog /// 160199_at MG-U74Av2 // heterogeneous nuclear ribonucleoprotein C Curated Ortholog /// aa543665_f_at Mu11KsubA // heterogeneous nuclear ribonucleoprotein C Curated Ortholog /// 1418693_at MOE430A // heterogeneous nuclear ribonucleoprotein C Curated Ortholog /// C80478_rc_f_at Mu11KsubA // heterogeneous nuclear ribonucleoprotein C Curated Ortholog chr14q11.2 // 15466029-15466354 // - // 100 /// chr2q32.2 // 189491913-189492238 // + // 99 Hs.406125 // 5 // NM_004500 // heterogeneous nuclear ribonucleoprotein C (C1/C2) // chr14 // 15465987-15524855 // - /// Hs.406125 // 5 // NM_031314 // heterogeneous nuclear ribonucleoprotein C (C1/C2) // chr14 // 15465987-15524855 // - 200015_s_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_004404.1 "gb:NM_004404.1 /DEF=Homo sapiens neural precursor cell expressed, developmentally down-regulated 5 (NEDD5), mRNA. /FEA=mRNA /GEN=NEDD5 /PROD=neural precursor cell expressed, developmentallydown-regulated 5 /DB_XREF=gi:4758157 /UG=Hs.155595 neural precursor cell expressed, developmentally down-regulated 5 /FL=gb:D28540.1 gb:NM_004404.1 gb:D63878.1" g4758157 Hs.155595.0 "1500074338 (2 transcripts, 1 gene cluster)" "neural precursor cell expressed, developmentally down-regulated 5" NEDD5 Chr:2q37 Hs.155595 4735 AAH33559 /// Q15019 /// Q96CB0 --- --- ENSG00000168385 --- "NM_004404 // neural precursor cell expressed, developmentally down-regulated 5" --- --- --- --- --- --- --- --- --- --- IPR000038 // Cell division/GTP binding protein GTP_CDC // Cell division protein;7.3e-203 IPB000765 // GTP1/OBG family;0.00012 d1h65a_ // c.37.1.8 // Chloroplast protein translocon GTPase Toc34 ;3.99e-27 --- --- "4758158 // neural precursor cell expressed, developmentally down-regulated 5 [Homo sapiens];0.0 /// 15680208 // Similar to neural precursor cell expressed, developmentally down-regulated 5 [Homo sapiens];0.0" "SEP2_MOUSE // Gene:SEPT2 Gene:NEDD5 Gene:NEDD-5 SEPTIN 2 (NEDD5 PROTEIN). length=361;0 /// O95648 // HYPOTHETICAL 17.0 KDA PROTEIN. length=150;1e-56 /// Q9H5B2 // Gene-TRE:BA291L22.2 BA291L22.2 (SIMILAR TO CDC10 (CELL DIVISION CYCLE 10, S. CEREVISIAE, HOMOLOG)) (FRAGMENT). length=114;9e-31 /// Q96CB0 // SIMILAR TO NEURAL CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED 5. length=361;0 /// Q91Y81 // Gene-TRE:VESP11 VASCULAR ENDOTHELIAL CELL SPECIFIC PROTEIN 11. length=361;0 /// SEP5_MOUSE // Gene:SEPT5 Gene:PNUTL1 SEPTIN 5 (PEANUT-LIKE PROTEIN 1) (CELL DIVISION CONTROL RELATED PROTEIN 1) (CDCREL-1) (FRAGMENT). length=347;1e-119 /// SEP2_HUMAN // SW:Q14132 Gene:SEPT2 Gene:NEDD5 Gene:DIFF6 Gene:KIAA0158 Septin 2 (NEDD5 protein homolog). length=361;0" 1368984_at RAE230A // 89.77% septin 2 Putative Ortholog /// 1388389_at RAE230A // 89.77% septin 2 Putative Ortholog /// rc_AI179570_at RG-U34C // 89.77% septin 2 Putative Ortholog /// 1423472_at MOE430A // septin 2 Curated Ortholog /// 97543_at MG-U74Av2 // septin 2 Curated Ortholog /// 1423473_at MOE430A // septin 2 Curated Ortholog /// D49382_s_at Mu11KsubA // septin 2 Curated Ortholog chr2q37.3 // 239999937-240000365 // - // 100 "Hs.155595 // 3 // NM_004404 // neural precursor cell expressed, developmentally down-regulated 5 // chr2 // 239999886-240038648 // -" 200016_x_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_002136.1 "gb:NM_002136.1 /DEF=Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), mRNA. /FEA=mRNA /GEN=HNRPA1 /PROD=heterogeneous nuclear ribonucleoprotein A1 /DB_XREF=gi:4504444 /UG=Hs.249495 heterogeneous nuclear ribonucleoprotein A1 /FL=gb:NM_002136.1" g4504444 Hs.249495.0 "1500074339 (16 transcripts, 11 gene clusters)" heterogeneous nuclear ribonucleoprotein A1 HNRPA1 Chr:12q13.1 Hs.376844 3178 AAH02355 /// AAH09600 /// AAH12158 /// AAH33714 /// P09651 /// Q9BSM5 --- --- ENSG00000135486 --- NM_002136 // heterogeneous nuclear ribonucleoprotein A1 isoform a /// NM_031157 // heterogeneous nuclear ribonucleoprotein A1 isoform b 6405 // RNA-nucleus export // predicted/computed /// 6397 // mRNA processing // predicted/computed 5737 // cytoplasm // experimental evidence /// 5654 // nucleoplasm // experimental evidence 3676 // nucleic acid binding // extended:Unknown; rrm; 7.2e-22 /// 3723 // RNA binding // experimental evidence /// 8436 // heterogeneous nuclear ribonucleoprotein // experimental evidence RNA-binding protein // experimental evidence Nuclear-cytoplasmic transport // predicted/computed /// RNA processing/modification // predicted/computed RNA-associated // experimental evidence --- Cytoplasmic // experimental evidence /// Nuclear // experimental evidence --- --- IPR000504 // RNA-binding region RNP-1 (RNA recognition motif) "rrm // RNA recognition motif. (a.k.a. RRM, RBD, or;6.8e-50" IPB002989 // Mycobacterial pentapeptide repeats;0.00079 /// IPB001285 // Synaptophysin/synaptoporin;0.0019 "d1ha1_1 // d.58.7.1 // Nuclear ribonucleoprotein A1, RNP A1, UP1 ;4.92e-26 /// d1ha1_1 // d.58.7.1 // Nuclear ribonucleoprotein A1, RNP A1, UP1 ;1.5e-25" --- --- "8393547 // heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus];0.0 /// 133254 // Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1);0.0 /// 4504445 // heterogeneous nuclear ribonucleoprotein A1, isoform a; nuclear ribonucleoprotein particle A1 protein; helix-destabilizing protein; single-strand DNA-binding protein UP1; heterogeneous nuclear ribonucleoprotein core protein A1; heterogeneous nuclear ribonucleoprotein A1B protein; heterogeneous nuclear ribonucleoprotein B2 protein [Homo sapiens];0.0 /// 14043070 // heterogeneous nuclear ribonucleoprotein A1, isoform b; nuclear ribonucleoprotein particle A1 protein; helix-destabilizing protein; single-strand DNA-binding protein UP1; heterogeneous nuclear ribonucleoprotein core protein A1; heterogeneous nuclear ribonucleoprotein A1B protein; heterogeneous nuclear ribonucleoprotein B2 protein [Homo sapiens];0.0" "ROA2_MOUSE // Gene:HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 / hnRNP B1). length=341;1e-119 /// ROA1_RAT // Gene:HNRPA1 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1 (HELIX-DESTABILIZING PROTEIN) (SINGLE-STRAND BINDING PROTEIN) (HNRNP CORE PROTEIN A1) (HDP). length=319;0 /// Q9BSM5 // HYPOTHETICAL 31.8 KDA PROTEIN (FRAGMENT). length=298;1e-179 /// Q9H4S1 // Gene-TRE:BA438F9.2 BA438F9.2 (NOVEL PROTEIN SIMILAR TO HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1 (HNRPA1)) (FRAGMENT). length=70;4e-35 /// Q91ZR9 // Gene-TRE:HNRPA2B1 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A2/B1 (FRAGMENT). length=342;1e-119 /// ROA1_MACMU // Gene:HNRPA1 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1 (HELIX-DESTABILIZING PROTEIN) (SINGLE-STRAND BINDING PROTEIN) (HNRNP CORE PROTEIN A1). length=319;0 /// Q9CRI0 // Gene-TRE:2410013L13RIK ES CELLS CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:2410013L13, FULL INSERT SEQUENCE (FRAGMENT). length=139;8e-66 /// ROA1_HUMAN // Gene:HNRPA1 Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1). length=371;0 /// ROA1_MOUSE // SW:P97312 Gene:HNRPA1 Gene:FLI-2 Gene:TIS Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed). length=319;0 /// O95024 // Gene-TRE:WUGSC:H_DJ1093O17.1 WUGSC:H_DJ1093O17.1 PROTEIN. length=317;1e-175" rc_AA965147_at RG-U34A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 1387872_at RAE230A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// M12156_at RG-U34A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 1375612_at RAE230A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 1455305_x_at MOE430A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 1430020_x_at MOE430A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 92724_at MG-U74Av2 // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// d86729_s_at Mu11KsubA // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 1455740_at MOE430A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 1430019_a_at MOE430A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 1436549_a_at MOE430A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 97272_at MG-U74Av2 // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 1423531_a_at MOE430A // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog /// 100371_at MG-U74Av2 // heterogeneous nuclear ribonucleoprotein A1 Curated Ortholog chr12q13.13 // 54792000-54792514 // + // 100 /// chr16q12.2 // 55808766-55809283 // - // 98 /// chr18q12.1 // 29810731-29811251 // - // 98 /// chr2q33.1 // 200653575-200654096 // + // 99 /// chr8q23.3 // 115102972-115103488 // - // 98 Hs.376844 // 7 // NM_002136 // heterogeneous nuclear ribonucleoprotein A1 // chr12 // 54788001-54792544 // + /// Hs.376844 // 7 // NM_031157 // heterogeneous nuclear ribonucleoprotein A1 // chr12 // 54788001-54792544 // + 200017_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_002954.1 "gb:NM_002954.1 /DEF=Homo sapiens ribosomal protein S27a (RPS27A), mRNA. /FEA=mRNA /GEN=RPS27A /PROD=ribosomal protein S27a /DB_XREF=gi:4506712 /UG=Hs.3297 ribosomal protein S27a /FL=gb:BC001392.1 gb:BC005328.1 gb:NM_002954.1" g4506712 Hs.3297.0 --- ribosomal protein S27a RPS27A Chr:2p16 Hs.311640 6233 AAB21188 /// CAA44911 /// P02248 /// P14798 --- --- --- --- NM_002954 // ubiquitin and ribosomal protein S27a precursor --- --- --- --- --- --- --- --- Proteasome_Degradation --- IPR000626 // Ubiquitin domain /// IPR002906 // Ribosomal protein S27a Ribosomal_S27 // Ribosomal protein S27a;2.2e-32 /// ubiquitin // Ubiquitin family;1.3e-42 PR01475 // Parkin signature;8.4e-06 d1ubi__ // d.15.1.1 // Ubiquitin ;7.74e-33 --- --- 600539 // ubiquitin;6e-88 /// 4506713 // ubiquitin and ribosomal protein S27a precursor; ubiquitin carboxyl extension protein 80; 40S ribosomal protein S27a; ubiquitin; ubiquitin-CEP80 [Homo sapiens];6e-88 Q93725 // Gene-TRE:F45H11.2 F45H11.2 PROTEIN. length=77;5e-22 /// UBIQ_YEAST // Gene:UBI1 Gene:RPL40A Gene:YIL148W Gene:UBI2 Gene:RPL40B Gene:YKR094C) AND Gene:UBI3 Gene:RPS31 Gene:YLR167W Gene:L9470.14 Gene:UBI4 Gene:SCD2 Gene:YLL039C Ubiquitin. length=76;3e-36 /// RS37_YEAST // SW:P14800 Gene:UBI3 Gene:RPS31 Gene:YLR167W Gene:L9470.14 40S ribosomal protein S37 (CEP76) (YS24). length=76;6e-26 /// Q9BQ77 // RIBOSOMAL PROTEIN S27A. length=156;7e-89 /// R27A_HUMAN // SW:Q9BQ77 Gene:RPS27A Gene:UBA80 Gene:UBCEP1 40S ribosomal protein S27a. length=80;1e-44 /// UBIQ_CAEEL // Gene:UBQ-1 Gene:UBIA Gene:F25B5.4 Gene:UBQ-2 Gene:UBIB UBIQUITIN. length=76;2e-36 /// UBIQ_SOYBN // Ubiquitin. length=76;1e-35 /// Q24575 // Gene-TRE:UBI-P63E Gene-TRE:CG11624 UBIQUITIN (FRAGMENT). length=76;4e-36 /// Q41965 // UBIQUITIN (FRAGMENT). length=68;6e-25 /// O65381 // Gene-TRE:F12F1.15 F12F1.15 PROTEIN. length=78;4e-19 /// UBIQ_HUMAN // SW:P02249 SW:P02250 SW:Q29120 SW:Q91887 SW:Q91888 Gene:UBA52 Gene:UBCEP2 Gene:UBB Gene:UBC Gene:UBA80 Gene:UBCEP1 Gene:RPS27A Ubiquitin. length=76;2e-37 /// Q03919 // Gene-TRE:RUB1 Gene-TRE:YDR139C HYPOTHETICAL 8.7 KDA PROTEIN. length=77;1e-17 /// UBIQ_DROME // SW:Q9VQX7 SW:Q9VKW6 Gene:RPL40 Gene:CG2960 Gene:RPS27A Gene:UBI-F80 Gene:UBI-F Gene:CG5271) AND Gene:UBI-P63E Gene:UBI-M Gene:CG11624 Ubiquitin. length=76;2e-37 /// Q9LDJ2 // F26F24.28 (F28C11.5). length=156;1e-71 /// Q9BX44 // Gene-TRE:BA92K2.2 BA92K2.2 (SIMILAR TO UBIQUITIN). length=156;2e-84 /// R27A_MOUSE // SW:Q9D2W3 Gene:RPS27A 40S ribosomal protein S27a. length=80;2e-44 /// Q8WYN8 // Gene-TRE:RPS27A RIBOSOMAL PROTEIN S27A (FRAGMENT). length=34;3e-12 /// Q41930 // POLYUBIQUITIN (FRAGMENT). length=38;1e-13 /// Q8WYN9 // Gene-TRE:RPS27A RIBOSOMAL PROTEIN S27A (FRAGMENT). length=121;6e-69 /// Q24577 // Gene-TRE:UBI-P63E Gene-TRE:CG11624 UBIQUITIN (FRAGMENT). length=76;1e-36 /// UBIQ_HUMAN // SW:P02249 SW:P02250 SW:Q29120 SW:Q91887 SW:Q91888 Gene:UBA52 Gene:UBCEP2 Gene:UBB Gene:UBC Gene:UBA80 Gene:UBCEP1 Gene:RPS27A Ubiquitin. length=76;4e-37 /// P97621 // POLYUBIQUITIN (FRAGMENT). length=41;4e-17 /// Q07188 // Gene-TRE:UBI4 Gene-TRE:YLL039C UBIQUITIN. length=47;1e-18 /// Q43354 // UBIQUITINE (FRAGMENT). length=86;5e-31 /// R27A_DROME // SW:Q9VKW6 Gene:RPS27A Gene:UBI-M Gene:UB3-D Gene:UBI-F80 Gene:CG5271 40S RIBOSOMAL PROTEIN S27A. length=80;1e-35 /// Q42009 // UBIQUITIN (FRAGMENT). length=52;1e-15 /// Q24576 // Gene-TRE:UBI-P63E Gene-TRE:CG11624 UBIQUITIN (FRAGMENT). length=75;7e-35 /// Q27927 // Gene-TRE:UBI-P63E Gene-TRE:CG11624 UBIQUITIN (FRAGMENT). length=76;7e-37 /// R27A_MOUSE // SW:Q9D2W3 Gene:RPS27A 40S ribosomal protein S27a. length=80;6e-45 /// Q9VKW6 // Gene-TRE:RPS27A RPS27A PROTEIN. length=156;9e-80 /// UBIQ_HUMAN // SW:P02249 SW:P02250 SW:Q29120 SW:Q91887 SW:Q91888 Gene:UBA52 Gene:UBCEP2 Gene:UBB Gene:UBC Gene:UBA80 Gene:UBCEP1 Gene:RPS27A Ubiquitin. length=76;8e-38 /// NED8_HUMAN // Gene:NEDD8 Ubiquitin-like protein NEDD8. length=81;8e-21 1367624_at RAE230A // 89.58% activating transcription factor ATF-4 Putative Ortholog /// rc_AA891729_at RG-U34A // 89.58% ribosomal protein S27a Putative Ortholog /// rc_AI012335_at RG-U34B // 89.58% activating transcription factor ATF-4 Putative Ortholog /// 1367685_at RAE230A // 89.58% ribosomal protein S27a Putative Ortholog /// rc_AI179381_at RG-U34C // 89.58% activating transcription factor ATF-4 Putative Ortholog /// aa473182_f_at Mu11KsubA // ribosomal protein S27a Curated Ortholog /// 93030_at MG-U74Av2 // ribosomal protein S27a Curated Ortholog /// 1449196_a_at MOE430A // ribosomal protein S27a Curated Ortholog chr16q21 // 61175140-61175620 // - // 98 /// chr2p16.1 // 55646127-55648888 // + // 99 Hs.311640 // 2 // AK093614 // ribosomal protein S27a // chr2 // 55646008-55648929 // + 200018_at HG-U133A Homo sapiens 1-Mar-03 Exemplar RefSeq NM_001017.1 "gb:NM_001017.1 /DEF=Homo sapiens ribosomal protein S13 (RPS13), mRNA. /FEA=mRNA /GEN=RPS13 /PROD=ribosomal protein S13 /DB_XREF=gi:4506684 /UG=Hs.165590 ribosomal protein S13 /FL=gb:BC000475.1 gb:L01124.1 gb:NM_001017.1" g4506684 Hs.165590.0 --- ribosomal protein S13 RPS13 Chr:11p15 Hs.165590 6207 Q02546 --- --- ENSG00000110700 --- NM_001017 // ribosomal protein S13 6412 // protein biosynthesis // predicted/computed 5843 // cytosolic small ribosomal subunit (sensu Eukarya) // predicted/computed 3735 // structural protein of ribosome // predicted/computed /// 3723 // RNA binding // predicted/computed RNA-binding protein // not recorded /// Ribosomal subunit // not recorded Protein synthesis // not recorded Ribosome-associated // not recorded General cellular role // not recorded Cytoplasmic // not recorded --- --- IPR000589 // Ribosomal protein S15 Ribosomal_S15 // Ribosomal protein S15;3.3e-30 IPB000589 // Ribosomal protein S15;1.5e-26 d1a32__ // a.16.1.2 // Ribosomal protein S15 ;2.21e-08 --- --- 4506685 // ribosomal protein S13; 40S ribosomal protein S13 [Homo sapiens];3e-81 /// 1350933 // 40S RIBOSOMAL PROTEIN S13;6e-81 O81311 // Gene-TRE:F6N15.7 Gene-TRE:AT4G00100 F6N15.7 PROTEIN (PUTATIVE RIBOSOMAL PROTEIN S13). length=150;2e-62 /// Q93V69 // AT3G60770/T4C21_180. length=151;1e-64 /// RS13_DROME // SW:Q9VLN5 Gene:RPS13 Gene:RP17 Gene:M(2)32A Gene:CG13389 40S ribosomal protein S13. length=150;1e-73 /// RS13_HUMAN // SW:P19116 SW:Q29200 Gene:RPS13 40S ribosomal protein S13. length=150;3e-82 /// RS13_ARATH // Gene:RPS13 40S RIBOSOMAL PROTEIN S13 (FRAGMENT). length=150;1e-64 /// Q93WJ4 // AT3G60770/T4C21_180. length=151;5e-64 /// Q9LZY6 // Gene-TRE:T4C21_180 RIBOSOMAL PROTEIN S13-LIKE. length=150;7e-62 /// RS13_CAEEL // Gene:RPS-13 Gene:C16A3.9 40S ribosomal protein S13. length=150;2e-65 /// Q921R2 // SIMILAR TO RIBOSOMAL PROTEIN S13. length=140;1e-76 /// RS13_HUMAN // SW:P19116 SW:Q29200 Gene:RPS13 40S ribosomal protein S13. length=150;1e-81 /// Q9SLR4 // Gene-TRE:ATRPS13A Gene-TRE:F6N15.7 CYTOPLASMIC RIBOSOMAL PROTEIN S13 (AT4G00100/F6N15_7) (SIMILAR TO RIBOSOMAL PROTEIN S13). length=151;3e-65 /// Q9VLN5 // Gene-TRE:RPS13 RPS13 PROTEIN. length=151;3e-74 /// RS13_YEAST // Gene:RPS13 Gene:RPS13C Gene:YDR064W Gene:YD9609.18 Gene:D4252 40S RIBOSOMAL PROTEIN S13 (S27A) (YS15). length=150;2e-65 "rc_AI233114_at RG-U34C // 85.71% ESTs, Highly similar to S29510 ubiquinol--cytochrome-c reductase (EC 1.10.2.2) core protein II precursor - rat [R.norvegicus] Putative Ortholog /// rc_AI235358_at RG-U34A // 85.71% ESTs, Highly similar to S29510 ubiquinol--cytochrome-c reductase (EC 1.10.2.2) core protein II precursor - rat [R.norvegicus] Putative Ortholog /// 1382280_at RA