Microarray Shared Research Facility

Welcome Overview BioAnalyzer Data Analysis GeneChip System Spot Array System Microarray Services Forms Download News FAQ Contact Us

News

Microarray Training Series by Dr. Tearina Chu

MICROARRAY DATA ANALYSIS USING IMAGENE
Date: April 15, 2003
Time: 3:30 P.M.
Location: Annenberg 19-51.

This is a BEGINNER level training course

This lecture will teach you:

  1. how to translate your image (tiff file) to digitized data file;
  2. how to manage the non-specific fluorescence spots on your arrays;
  3. how to read your spotted array (coordination of the spot, sub grid, metagrid);
  4. how to grid your spotted array (spot-finding algorithm);
  5. which grid file you should use for your batch-labeled slide and how to download it;
  6. what spot information you will get from your grid file;
  7. how do you get the most updated clone information from source database;
  8. what mathmatical and statistical data you'll obtain from the output data file;
  9. light discussion about the normalization strategies;

and more.